RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TRAV6A0A075B6T7 132 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 A0A087WZY1 265 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 A0A0B4J203 849 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 A0A1W2PQ72 361 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 TVP23AA6NH52 213 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 LIPT2A6NK58 231 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 NPIPA5E9PKD4 350 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 MS4A18H0YCH9 400 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 CREBL2O60519 120 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-204ENST00000433822 SLC16A7O60669 478 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 SDC3O75056 442 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 CTAG2O75638 210 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 HEXBP07686 556 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 C1QTNF9P0C862 333 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 AKAIN1P0CW23 69 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 FGF5P12034 268 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF823P16415 610 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 TBPP20226 339 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 HSD11B1P28845 292 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 CCKBRP32239 447 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 EIF1P41567 113 aaKnown RBP6.63□□□□□ -1.35
COL17A1-204ENST00000433822 ADAM8P78325 824 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 HSF1Q00613 529 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 GALK2Q01415 458 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 IL11RAQ14626 422 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 FAM189A2Q15884 450 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 BTBD16Q32M84 506 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 PLPPR5Q32ZL2 321 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 MS4A18Q3C1V0 323 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 THEM4Q5T1C6 240 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 C1QL3Q5VWW1 255 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 TMEM225Q6GV28 225 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 C3orf33Q6P1S2 294 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 PAPD4Q6PIY7 484 aaKnown RBP6.63□□□□□ -1.35
COL17A1-204ENST00000433822 LANCL3Q6ZV70 420 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 WDR5BQ86VZ2 330 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 PRR22Q8IZ63 422 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 ABCA7Q8IZY2 2146 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 SUMF1Q8NBK3 374 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 CCDC54Q8NEL0 328 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 ST7LQ8TDW4 575 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 GPX8Q8TED1 209 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF431Q8TF32 576 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-204ENST00000433822 DUSP19Q8WTR2 217 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 RNF133Q8WVZ7 376 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 TSEN15Q8WW01 171 aaKnown RBP6.63□□□□□ -1.35
COL17A1-204ENST00000433822 SLC25A28Q96A46 364 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 PHF21AQ96BD5 680 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 FAM3DQ96BQ1 224 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 CLIP3Q96DZ5 547 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 SORCS2Q96PQ0 1159 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 KLHDC3Q9BQ90 382 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 WDR77Q9BQA1 342 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-204ENST00000433822 NUDT22Q9BRQ3 303 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 UQCC2Q9BRT2 126 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 BEX2Q9BXY8 128 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 MRPL13Q9BYD1 178 aaKnown RBP6.63□□□□□ -1.35
COL17A1-204ENST00000433822 FOXQ1Q9C009 403 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF436Q9C0F3 470 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-204ENST00000433822 UPB1Q9UBR1 384 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 NPIPA1Q9UND3 350 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 HDGFL3Q9Y3E1 203 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 HSPB11Q9Y547 144 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 LRP12Q9Y561 859 aa6.63□□□□□ -1.35
COL17A1-204ENST00000433822 GON4LQ3T8J9 2241 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 LY6G6EA0A0G2JKS1 128 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 A0A1B0GVC2 190 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 LINC00862A6NCI5 91 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 A6NIN4 97 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 TMEM200CA6NKL6 621 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 HMSDA8MTL9 139 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 FAM171A2A8MVW0 826 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 C11orf98E9PRG8 122 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 H7C1C5 153 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 GMDSO60547 372 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 MT-ND4P03905 459 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 LPLP06858 475 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 CD63P08962 238 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SPARCP09486 303 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 DNASE1P24855 282 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 HTR2CP28335 458 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 PTGDSP41222 190 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SOX2P48431 317 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 POU3F4P49335 361 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 CCR6P51684 374 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF41P51814 821 aaPredicted RBP6.62□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF133P52736 654 aaPredicted RBP6.62□□□□□ -1.35
COL17A1-204ENST00000433822 EMP2P54851 167 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 PER3P56645 1201 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 TAS2R19P59542 299 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 LCN6P62502 163 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 DBPQ10586 325 aaPredicted RBP6.62□□□□□ -1.35
COL17A1-204ENST00000433822 MADCAM1Q13477 382 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 EIF2B1Q14232 305 aaKnown RBP6.62□□□□□ -1.35
COL17A1-204ENST00000433822 LYSMD4Q5XG99 296 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SLC25A25Q6KCM7 469 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF529Q6P280 563 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 ESPNLQ6ZVH7 1005 aa6.62□□□□□ -1.35
COL17A1-204ENST00000433822 SLC35D2Q76EJ3 337 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms