RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 GM2AP17900 193 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 RFC3P40938 356 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 ID1P41134 155 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 RBP2P50120 134 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 PCBP3P57721 371 aaKnown RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 HSF1Q00613 529 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 INSM1Q01101 510 aaPredicted RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 SLC9A3R2Q15599 337 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 PGGHGQ32M88 737 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 GLYR1Q49A26 553 aaPredicted RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 TMEM64Q6YI46 380 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 FAM122BQ7Z309 247 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 OR2M3Q8NG83 312 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 OR5B3Q8NH48 314 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 SMAP2Q8WU79 429 aaPredicted RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 CCL17Q92583 94 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 SLCO4A1Q96BD0 722 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 C8orf44Q96CB5 159 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 VPS25Q9BRG1 176 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 XYLT2Q9H1B5 865 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 ASIC5Q9NY37 505 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 NAGKQ9UJ70 344 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 EXO1Q9UQ84 846 aaKnown RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 ZNF835Q9Y2P0 537 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 MBLAC1A4D2B0 266 aaPredicted RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 DBX1A6NMT0 343 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 METTL12A8MUP2 240 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 C1orf196B1AJZ1 125 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 K7EPK0 472 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 PRAF2O60831 178 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 CELA3AP09093 270 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 RAB40ALP0C0E4 278 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 ANKRD34CP0C6C1 535 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 SDC1P18827 310 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 MNX1P50219 401 aaPredicted RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 FAM189BP81408 668 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 SRSF2Q01130 221 aaKnown RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 RPL22L1Q6P5R6 122 aaKnown RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 FAM71E2Q8N5Q1 922 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 TMEM163Q8TC26 289 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 RAB40AQ8WXH6 277 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 HYLS1Q96M11 299 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 JAM3Q9BX67 310 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 ABCG5Q9H222 651 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 PLK3Q9H4B4 646 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 ZCCHC4Q9H5U6 513 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 DDX31Q9H8H2 851 aaKnown RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 PLA2G3Q9NZ20 509 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 PTTG2Q9NZH5 202 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 OR52A1Q9UKL2 312 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 LOC390937A0A1W2PQ73 354 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 ZNF195O14628 629 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 CXCL13O43927 109 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 TNFRSF1BP20333 461 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 HLA-DMAP28067 261 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 HTR2CP28335 458 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 OPRM1P35372 400 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 METAP1P53582 386 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 BCL7AQ4VC05 210 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 TMEM236Q5W0B7 351 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 SCD5Q86SK9 330 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 OR10Z1Q8NGY1 313 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 ZNF480Q8WV37 535 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 EDARADDQ8WWZ3 215 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 PDXPQ96GD0 296 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 SEC22AQ96IW7 307 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 TMEM56Q96MV1 263 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 STACQ99469 402 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 CHRDL1Q9BU40 450 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 RAB33BQ9H082 229 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 EMC7Q9NPA0 242 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 COA4Q9NYJ1 87 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 LHX3Q9UBR4 397 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 NKX1-2Q9UD57 310 aaPredicted RBP5.23□□□□□ -1.57
HERC4-206ENST00000427635 ZNF391Q9UJN7 358 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 HS3ST2Q9Y278 367 aa5.23□□□□□ -1.57
HERC4-206ENST00000427635 H7C1C5 153 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 SDCBPO00560 298 aaPredicted RBP5.22□□□□□ -1.57
HERC4-206ENST00000427635 WNT7AO00755 349 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 BHLHE40O14503 412 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 MBTPS2O43462 519 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 CDC14BO60729 498 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 OR2J2O76002 312 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 GYPBP06028 91 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 FCER1GP30273 86 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 NKX2-5P52952 324 aaPredicted RBP5.22□□□□□ -1.57
HERC4-206ENST00000427635 MFAP4P55083 255 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 SNRPGP62308 76 aaKnown RBP5.22□□□□□ -1.57
HERC4-206ENST00000427635 GSG1Q2KHT4 349 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 HENMT1Q5T8I9 393 aaKnown RBP5.22□□□□□ -1.57
HERC4-206ENST00000427635 FCRL6Q6DN72 434 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 MRM1Q6IN84 353 aaKnown RBP5.22□□□□□ -1.57
HERC4-206ENST00000427635 WDTC1Q8N5D0 677 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 OR4F17Q8NGA8 305 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 OR8J2Q8NGG1 315 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 OR5D13Q8NGL4 314 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 OR4F5Q8NH21 305 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 ASB11Q8WXH4 323 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 TLCD1Q96CP7 247 aa5.22□□□□□ -1.57
HERC4-206ENST00000427635 OR4F4Q96R69 305 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms