RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CD5P06127 495 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 GUSBP08236 651 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 OR8U9P0C7N5 309 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 DUX4L2P0CJ85 424 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 DUX4L3P0CJ86 424 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 DUX4L4P0CJ87 422 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 DUX4L5P0CJ88 424 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 DUX4L6P0CJ89 424 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 DUX4L7P0CJ90 424 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 HIST1H1EP10412 219 aaKnown RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 PSG1P11464 419 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 GTF2F2P13984 249 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 RPL35AP18077 110 aaKnown RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 SDC1P18827 310 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 GDF1P27539 372 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 HTR1FP30939 366 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 CCKARP32238 428 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 GPR183P32249 361 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ARL2P36404 184 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 PEX3P56589 373 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM33P57088 247 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 OR10A3P58181 314 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 TAS2R31P59538 309 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ERVPABLB-1P60509 514 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 RANP62826 216 aaKnown RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 TGFBR3Q03167 851 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ACVR1Q04771 509 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 CD164Q04900 197 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 LTBQ06643 244 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF155Q12901 538 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 IL18R1Q13478 541 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 AQP6Q13520 282 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 KIAA0141Q14154 515 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 PRPSAP1Q14558 356 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 TRAM1Q15629 374 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 TBC1D28Q2M2D7 210 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ZBED5Q49AG3 693 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 FFAR4Q5NUL3 377 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 BRMS1LQ5PSV4 323 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 DUX4L9Q6RFH8 374 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM179Q6ZVK1 233 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 PRSS48Q7RTY5 328 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 PIM3Q86V86 326 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 HORMAD1Q86X24 394 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 NIT1Q86X76 327 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 KIR2DL5AQ8N109 375 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 RBMXL3Q8N7X1 1067 aaKnown RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 OR8G5Q8NG78 346 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 OR1M1Q8NGA1 313 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 OR11L1Q8NGX0 322 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 OR2T11Q8NH01 316 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 OR8U1Q8NH10 309 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 OR1L3Q8NH93 324 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 KIR2DL5BQ8NHK3 375 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 RPLP0P6Q8NHW5 317 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 MRGPRDQ8TDS7 321 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 TRUB1Q8WWH5 349 aaKnown RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 MAFIPQ8WZ33 124 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 RCN3Q96D15 328 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 DNAJA3Q96EY1 480 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ADGRG7Q96K78 797 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 SCGB3A2Q96PL1 93 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 PHB2Q99623 299 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 GPR22Q99680 433 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 FOXC2Q99958 501 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 PDCD1LG2Q9BQ51 273 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 CDCA4Q9BXL8 241 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 CHIAQ9BZP6 476 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 CWH43Q9H720 699 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 FKRPQ9H9S5 495 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 PELI2Q9HAT8 420 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 MYOZ1Q9NP98 299 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ACOT13Q9NPJ3 140 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 GIN1Q9NXP7 522 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 EHFQ9NZC4 300 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF224Q9NZL3 707 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 MSRB1Q9NZV6 116 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 DUX4Q9UBX2 424 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF107Q9UII5 783 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-205ENST00000424674 KLHL21Q9UJP4 597 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ING4Q9UNL4 249 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 HS3ST3B1Q9Y662 390 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 NEDD4P46934 1319 aa3.09□□□□□ -1.91
SF3B1-205ENST00000424674 ROCK2O75116 1388 aaKnown RBP3.09□□□□□ -1.92
SF3B1-205ENST00000424674 FLT4P35916 1363 aa3.09□□□□□ -1.92
SF3B1-205ENST00000424674 TAF1P21675 1872 aa3.09□□□□□ -1.92
SF3B1-205ENST00000424674 TRIP12Q14669 1992 aaPredicted RBP3.09□□□□□ -1.92
SF3B1-205ENST00000424674 IQCMA0A1B0GVH7 501 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 FAM166BA8MTA8 275 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 DISC1C4P0D8 188 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 RAD51CO43502 376 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 NDUFA2O43678 99 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 CTSVO60911 334 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 NOS1APO75052 506 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-205ENST00000424674 UGT2B11O75310 529 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 FKBP6O75344 327 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 ENTPD6O75354 484 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 AQP8O94778 261 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 NUDT14O95848 222 aa3.08□□□□□ -1.92
SF3B1-205ENST00000424674 IGHV2-5P01817 119 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms