RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 CYB561A3Q8NBI2 242 aa13.12□□□□□ -0.31
SPC24-201ENST00000423327 AQP11Q8NBQ7 271 aa13.12□□□□□ -0.31
SPC24-201ENST00000423327 OR52E2Q8NGJ4 325 aa13.12□□□□□ -0.31
SPC24-201ENST00000423327 OR2T29Q8NH02 315 aa13.12□□□□□ -0.31
SPC24-201ENST00000423327 OR4Q3Q8NH05 313 aa13.12□□□□□ -0.31
SPC24-201ENST00000423327 C1orf21Q9H246 121 aa13.12□□□□□ -0.31
SPC24-201ENST00000423327 PURGQ9UJV8 347 aaKnown RBP13.12□□□□□ -0.31
SPC24-201ENST00000423327 POLR1DQ9Y2S0 133 aa13.12□□□□□ -0.31
SPC24-201ENST00000423327 WIPI2Q9Y4P8 454 aa13.12□□□□□ -0.31
SPC24-201ENST00000423327 U3KQV3 271 aa13.12□□□□□ -0.31
SPC24-201ENST00000423327 IDH3BO43837 385 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 TIMM8AO60220 97 aaPredicted RBP13.11□□□□□ -0.31
SPC24-201ENST00000423327 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
SPC24-201ENST00000423327 SOX14O95416 240 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 MT-ND5P03915 603 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 CD55P08174 381 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 NOS3P29474 1203 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 PYCR1P32322 319 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 RPS27P42677 84 aaKnown RBP13.11□□□□□ -0.31
SPC24-201ENST00000423327 TEKQ02763 1124 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 MVKQ03426 396 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 CDK5R2Q13319 367 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 PGM2L1Q6PCE3 622 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 OR10S1Q8NGN2 331 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 CMBLQ96DG6 245 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 COQ7Q99807 217 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 HDHD2Q9H0R4 259 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 DECR2Q9NUI1 292 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 ARMC1Q9NVT9 282 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 CGGBP1Q9UFW8 167 aaPredicted RBP13.11□□□□□ -0.31
SPC24-201ENST00000423327 CYB5R1Q9UHQ9 305 aa13.11□□□□□ -0.31
SPC24-201ENST00000423327 ARHGAP32A7KAX9 2087 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 DYSFO75923 2080 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 PLSCR5A0PG75 271 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 SRD5A1P18405 259 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 GSTM3P21266 225 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 DVL1P1P54792 670 aaPredicted RBP13.1□□□□□ -0.31
SPC24-201ENST00000423327 HLXQ14774 488 aaPredicted RBP13.1□□□□□ -0.31
SPC24-201ENST00000423327 MICAQ29983 383 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 FAM98BQ52LJ0 330 aaKnown RBP13.1□□□□□ -0.31
SPC24-201ENST00000423327 RPL13AP3Q6NVV1 102 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 ARL9Q6T311 187 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 COLCA1Q6ZS62 124 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 TRPM8Q7Z2W7 1104 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 TMEM179BQ7Z7N9 219 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 LNX2Q8N448 690 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 SLC37A3Q8NCC5 494 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 GJC3Q8NFK1 279 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 OR52L1Q8NGH7 329 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 SLC7A6OSQ96CW6 309 aaPredicted RBP13.1□□□□□ -0.31
SPC24-201ENST00000423327 HAVCR1Q96D42 359 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 ELMOD3Q96FG2 381 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 NIPSNAP1Q9BPW8 284 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 THTPAQ9BU02 230 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 LPAR2Q9HBW0 351 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 CYSLTR2Q9NS75 346 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 PTTG3PQ9NZH4 202 aa13.1□□□□□ -0.31
SPC24-201ENST00000423327 SAMHD1Q9Y3Z3 626 aaKnown RBP13.1□□□□□ -0.31
SPC24-201ENST00000423327 STAB1Q9NY15 2570 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 B4DSR2 109 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 CLDN25C9JDP6 229 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 J3QW42 95 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 TPD52L2O43399 206 aaKnown RBP13.09□□□□□ -0.31
SPC24-201ENST00000423327 IFNA2P01563 188 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 RAP2AP10114 183 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 LIPAP38571 399 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 PRSS12P56730 875 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
SPC24-201ENST00000423327 FBXW12Q6X9E4 464 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 OR5AS1Q8N127 324 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 LINC00471Q8N535 108 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 OR9Q1Q8NGQ5 310 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 BCAS4Q8TDM0 211 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 CANT1Q8WVQ1 401 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 MAP6Q96JE9 813 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 DCLRE1CQ96SD1 692 aaKnown RBP13.09□□□□□ -0.31
SPC24-201ENST00000423327 RBM4Q9BWF3 364 aaKnown RBP13.09□□□□□ -0.31
SPC24-201ENST00000423327 TSSK6Q9BXA6 273 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 NMNAT2Q9BZQ4 307 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 ZNF665Q9H7R5 613 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 REEP1Q9H902 201 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 TBC1D23Q9NUY8 699 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 ZDHHC8Q9ULC8 765 aa13.09□□□□□ -0.31
SPC24-201ENST00000423327 WNK2Q9Y3S1 2297 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 TVP23AA6NH52 213 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 PHF1O43189 567 aaPredicted RBP13.08□□□□□ -0.32
SPC24-201ENST00000423327 IGHV2-5P01817 119 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 MSMBP08118 114 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 ACSM4P0C7M7 580 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 CLUP10909 449 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 RAC2P15153 192 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 TUBG1P23258 451 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 RGS6P49758 472 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 TNFAIP6P98066 277 aaPredicted RBP13.08□□□□□ -0.32
SPC24-201ENST00000423327 TRAP1Q12931 704 aaKnown RBP13.08□□□□□ -0.32
SPC24-201ENST00000423327 CRMP1Q14194 572 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 HFEQ30201 348 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 NAA40Q86UY6 237 aa13.08□□□□□ -0.32
SPC24-201ENST00000423327 PHC2Q8IXK0 858 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms