RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 FAM78AQ5JUQ0 283 aa14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 C1QL3Q5VWW1 255 aa14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 TMPRSS9Q7Z410 1059 aa14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 ZDHHC22Q8N966 263 aa14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 MARCH1Q8TCQ1 289 aa14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 TCEAL3Q969E4 200 aa14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 TSACCQ96A04 125 aaPredicted RBP14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 ZNF775Q96BV0 537 aaPredicted RBP14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 BCL2L14Q9BZR8 327 aa14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 MRPL22Q9NWU5 206 aaKnown RBP14.95□□□□□ -0.02
NPC1L1-203ENST00000423141 C17orf51A8MQB3 221 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 H0Y8X5 98 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 RNASEK-C17orf49H0YIS7 233 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 RAB27BO00194 218 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 PMP2P02689 132 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 CD1CP29017 333 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 ACTR1BP42025 376 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 ACTR1AP61163 376 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 PPP1CAP62136 330 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 SGCAQ16586 387 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 EIF2S3LQ2VIR3 472 aaKnown RBP14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 WBP2NLQ6ICG8 309 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 SFTPA2Q8IWL1 248 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 C16orf52Q8NHV5 167 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 PATE1Q8WXA2 126 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 G6PC3Q9BUM1 346 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 GDF2Q9UK05 429 aaPredicted RBP14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 NUDT19A8MXV4 375 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 EIF1AYO14602 144 aaKnown RBP14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 WISP1O95388 367 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 S100A9P06702 114 aaKnown RBP14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 CD2P06729 351 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 EIF1AXP47813 144 aaKnown RBP14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 RPS21P63220 83 aaKnown RBP14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 PDGFRLQ15198 375 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 PNLIPRP3Q17RR3 467 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 C12orf76Q8N812 135 aaPredicted RBP14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 LIPHQ8WWY8 451 aa14.94□□□□□ -0.02
NPC1L1-203ENST00000423141 LOC101059948A0A1B0GTJ6 334 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 UBE2CO00762 179 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 FOLR2P14207 255 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 GNB3P16520 340 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 CD80P33681 288 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 EDARADDQ8WWZ3 215 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 HIST1H2BAQ96A08 127 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 SEC61A2Q9H9S3 476 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 GHRLQ9UBU3 117 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 MIOXQ9UGB7 285 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 ZNF107Q9UII5 783 aaPredicted RBP14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 RPH3AQ9Y2J0 694 aaPredicted RBP14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 LRP12Q9Y561 859 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 PHYHO14832 338 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 LRP3O75074 770 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 TIMP1P01033 207 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 SERPINA5P05154 406 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 PNMTP11086 282 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 RCC1P18754 421 aaPredicted RBP14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 NME2P22392 152 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 CPT2P23786 658 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 DNASE1L1P49184 302 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 RAB38P57729 211 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 HGFACQ04756 655 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 DHRS11Q6UWP2 260 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 DRAM2Q6UX65 266 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 SPRED2Q7Z698 418 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 CATSPERDQ86XM0 798 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 OR13C3Q8NGS6 347 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 OR51F2Q8NH61 342 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 TBX21Q9UL17 535 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 EMC9Q9Y3B6 208 aa14.93□□□□□ -0.02
NPC1L1-203ENST00000423141 TBC1D3DA0A087WVF3 549 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 C1orf196B1AJZ1 125 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 TBC1D3LB9A6J9 549 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 PRAMEF26H0Y7S4 382 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 MBTPS2O43462 519 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 SLC16A7O60669 478 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 MPZL1O95297 269 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 S100A6P06703 90 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 TBC1D3HP0C7X1 549 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 GDI1P31150 447 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 BTG2P78543 158 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 UNC119Q13432 240 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 SLC9A3R2Q15599 337 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 EMC4Q5J8M3 183 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 TBC1D3CQ6IPX1 549 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 TAF8Q7Z7C8 310 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 TBC1D3Q8IZP1 549 aaPredicted RBP14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 OR2I1PQ8NGU4 316 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 ADAMTS17Q8TE56 1095 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 THRSPQ92748 146 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 C8orf44Q96CB5 159 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 NECAB3Q96P71 396 aaPredicted RBP14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 NMES1Q9C002 83 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 SMCO4Q9NRQ5 59 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 RHBDD3Q9Y3P4 386 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 LTBP2Q14767 1821 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 SOX1O00570 391 aaPredicted RBP14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 MED6O75586 246 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 KAT7O95251 611 aa14.92□□□□□ -0.02
NPC1L1-203ENST00000423141 S100A8P05109 93 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms