RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 HIST1H1CP16403 213 aaKnown RBP21.58■■□□□ 1.05
SMDT1-202ENST00000422252 NOS3P29474 1203 aa21.58■■□□□ 1.05
SMDT1-202ENST00000422252 GSSP48637 474 aa21.58■■□□□ 1.05
SMDT1-202ENST00000422252 Q6ZR03 302 aa21.58■■□□□ 1.05
SMDT1-202ENST00000422252 OR4K13Q8NH42 304 aa21.58■■□□□ 1.05
SMDT1-202ENST00000422252 GNPDA2Q8TDQ7 276 aa21.58■■□□□ 1.05
SMDT1-202ENST00000422252 COQ7Q99807 217 aa21.58■■□□□ 1.05
SMDT1-202ENST00000422252 HDHD2Q9H0R4 259 aa21.58■■□□□ 1.05
SMDT1-202ENST00000422252 RAC2P15153 192 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 TNFRSF1AP19438 455 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 ERFP50548 548 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 COX10Q12887 443 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 TSPAN31Q12999 210 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 SCGB2A2Q13296 93 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 TEX29Q8N6K0 151 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 OR5L1Q8NGL2 311 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 OCEL1Q9H607 264 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 RPRD1BQ9NQG5 326 aaKnown RBP21.57■■□□□ 1.04
SMDT1-202ENST00000422252 IL19Q9UHD0 177 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 NPTNQ9Y639 398 aa21.57■■□□□ 1.04
SMDT1-202ENST00000422252 A0A0G2JMP0 313 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 A0A0X1KG70 313 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 IDH3BO43837 385 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 KRT36O76013 467 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 MNAT1P51948 309 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 HLXQ14774 488 aaPredicted RBP21.56■■□□□ 1.04
SMDT1-202ENST00000422252 PGBD2Q6P3X8 592 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 CORO6Q6QEF8 472 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 ZNF620Q6ZNG0 422 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 ZNF771Q7L3S4 317 aaPredicted RBP21.56■■□□□ 1.04
SMDT1-202ENST00000422252 ZBTB46Q86UZ6 589 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 SLC26A10Q8NG04 563 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 OR4M2Q8NGB6 313 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 APOBEC3DQ96AK3 386 aaPredicted RBP21.56■■□□□ 1.04
SMDT1-202ENST00000422252 TMEM106BQ9NUM4 274 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 DCAF16Q9NXF7 216 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 PTTG3PQ9NZH4 202 aa21.56■■□□□ 1.04
SMDT1-202ENST00000422252 DBPQ10586 325 aaPredicted RBP21.55■■□□□ 1.04
SMDT1-202ENST00000422252 CYP2R1Q6VVX0 501 aa21.55■■□□□ 1.04
SMDT1-202ENST00000422252 FBXW12Q6X9E4 464 aa21.55■■□□□ 1.04
SMDT1-202ENST00000422252 C1orf229Q6ZS94 237 aaPredicted RBP21.55■■□□□ 1.04
SMDT1-202ENST00000422252 SDR9C7Q8NEX9 313 aa21.55■■□□□ 1.04
SMDT1-202ENST00000422252 UBAP1Q9NZ09 502 aa21.55■■□□□ 1.04
SMDT1-202ENST00000422252 ACTR3BQ9P1U1 418 aa21.55■■□□□ 1.04
SMDT1-202ENST00000422252 OR6C68A6NDL8 312 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 SURF4O15260 269 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 AVPP01185 164 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 IGHV2-70P01814 119 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 HMGA2P52926 109 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 HNRNPA0Q13151 305 aaKnown RBP21.54■■□□□ 1.04
SMDT1-202ENST00000422252 SLC36A3Q495N2 470 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 OR5AS1Q8N127 324 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 ZNF283Q8N7M2 679 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 ITLN1Q8WWA0 313 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 TMPRSS13Q9BYE2 586 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 FN3KQ9H479 309 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 LYVE1Q9Y5Y7 322 aa21.54■■□□□ 1.04
SMDT1-202ENST00000422252 A0A0A6YYJ9 748 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 J3QLI3 93 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 ATP6V1B2P21281 511 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMDT1-202ENST00000422252 DCAF12L2Q5VW00 463 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 OR2T2Q6IF00 324 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 SLC18B1Q6NT16 456 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 RPL13AP3Q6NVV1 102 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 LINC00346Q8IVM7 164 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 LINC00471Q8N535 108 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 OR52L1Q8NGH7 329 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 OR52E2Q8NGJ4 325 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 ST7LQ8TDW4 575 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 OR2V2Q96R30 315 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 CDADC1Q9BWV3 514 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 EGLN3Q9H6Z9 239 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 PPP1R3CQ9UQK1 317 aa21.53■■□□□ 1.04
SMDT1-202ENST00000422252 LOC105371242A0A075B767 164 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 TNFRSF11BO00300 401 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 HLA-DQA2P01906 255 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 SBK2P0C263 348 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 GATA3P23771 443 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 RSPO1Q2MKA7 263 aaPredicted RBP21.52■■□□□ 1.04
SMDT1-202ENST00000422252 CLEC12AQ5QGZ9 265 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 SLC35F1Q5T1Q4 408 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 CFAP77Q6ZQR2 320 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 FITM2Q8N6M3 262 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 ATG16L2Q8NAA4 619 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 OR8G5Q8NG78 346 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 OR9Q2Q8NGE9 314 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 OR2AJ1Q8NGZ0 328 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 PITX2Q99697 317 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 BTBD10Q9BSF8 475 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 TRIM15Q9C019 465 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 CYB5R1Q9UHQ9 305 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 PCDHB10Q9UN67 800 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 CDH10Q9Y6N8 788 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 DYSFO75923 2080 aa21.52■■□□□ 1.04
SMDT1-202ENST00000422252 B2RBV5 119 aa21.51■■□□□ 1.03
SMDT1-202ENST00000422252 RBMXP38159 391 aaKnown RBP21.51■■□□□ 1.03
SMDT1-202ENST00000422252 MAGEA2P43356 314 aa21.51■■□□□ 1.03
SMDT1-202ENST00000422252 LCN2P80188 198 aa21.51■■□□□ 1.03
SMDT1-202ENST00000422252 ECH1Q13011 328 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms