RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 TLX2O43763 284 aaPredicted RBP10.72□□□□□ -0.69
SKA1-203ENST00000417656 ICMTO60725 284 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 NGFP01138 241 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 IGHV4-39P01824 125 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 MRPL3P09001 348 aaKnown RBP10.72□□□□□ -0.69
SKA1-203ENST00000417656 PAX1P15863 534 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 RAD52P43351 418 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 PPP1CBP62140 327 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 EIF2B1Q14232 305 aaKnown RBP10.72□□□□□ -0.69
SKA1-203ENST00000417656 MAD2L1BPQ15013 274 aaPredicted RBP10.72□□□□□ -0.69
SKA1-203ENST00000417656 PCK2Q16822 640 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 SLC35D3Q5M8T2 416 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 LCN1P1Q5VSP4 162 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 LPCAT4Q643R3 524 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 SPATC1Q76KD6 591 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 DPY19L4Q7Z388 723 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 FAM81AQ8TBF8 368 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 SLC25A40Q8TBP6 338 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 ST7LQ8TDW4 575 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 POFUT1Q9H488 388 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 DYNLRB1Q9NP97 96 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 GRIP1Q9Y3R0 1128 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 VSTM5A8MXK1 200 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 H7C417 338 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 CLPTM1O96005 669 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 MPV17P39210 176 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 ALDH3B1P43353 468 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 KLF3P57682 345 aaPredicted RBP10.71□□□□□ -0.69
SKA1-203ENST00000417656 EFNB1P98172 346 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 LRRC36Q1X8D7 754 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 KRTAP27-1Q3LI81 207 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 TMEM255AQ5JRV8 349 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 TEX30Q5JUR7 227 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 AADACL4Q5VUY2 407 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 NXNL2Q5VZ03 156 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 ARL9Q6T311 187 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 WFDC11Q8NEX6 87 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 IPCEF1Q8WWN9 437 aaPredicted RBP10.71□□□□□ -0.69
SKA1-203ENST00000417656 SLAMF6Q96DU3 332 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 TRMT61AQ96FX7 289 aaKnown RBP10.71□□□□□ -0.69
SKA1-203ENST00000417656 SORCS2Q96PQ0 1159 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 DCLRE1CQ96SD1 692 aaKnown RBP10.71□□□□□ -0.69
SKA1-203ENST00000417656 AMELYQ99218 206 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 DOK1Q99704 481 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 COPS4Q9BT78 406 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 OR2J1Q9GZK6 312 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 ELOVL3Q9HB03 270 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 DDX28Q9NUL7 540 aaKnown RBP10.71□□□□□ -0.69
SKA1-203ENST00000417656 IMPAD1Q9NX62 359 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 DNAJC27Q9NZQ0 273 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 DUSP13Q9UII6 198 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 KLHDC2Q9Y2U9 406 aa10.71□□□□□ -0.69
SKA1-203ENST00000417656 RTTNQ86VV8 2226 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 IGLV3-9A0A075B6K5 115 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 ZNF878C9JN71 531 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 E9PQ18 207 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 F5H5K5 113 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 M0R233 179 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 ACSM4P0C7M7 580 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 BMP4P12644 408 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 ZNF250P15622 560 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 PPOXP50336 477 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 CDC42P60953 191 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 ECH1Q13011 328 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 RSPO1Q2MKA7 263 aaPredicted RBP10.7□□□□□ -0.7
SKA1-203ENST00000417656 ALKBH6Q3KRA9 238 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 UNQ6126/PRO20091Q6UXV3 157 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 SHFQ7M4L6 423 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 GID4Q8IVV7 300 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 GALNT4Q8N4A0 578 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 SYNPRQ8TBG9 265 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 MARS2Q96GW9 593 aaKnown RBP10.7□□□□□ -0.7
SKA1-203ENST00000417656 HRASLS5Q96KN8 279 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 ABHD6Q9BV23 337 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 TPK1Q9H3S4 243 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 CENPMQ9NSP4 180 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 TBCCD1Q9NVR7 557 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 SMPD3Q9NY59 655 aaPredicted RBP10.7□□□□□ -0.7
SKA1-203ENST00000417656 PMF1-BGLAPU3KQ54 211 aa10.7□□□□□ -0.7
SKA1-203ENST00000417656 CREBBPQ92793 2442 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 ARID1AO14497 2285 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 SLC22A31A6NKX4 558 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 M0R135 149 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 LY6HO94772 140 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 ADRA2AP08913 450 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 ANOS1P23352 680 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 GCH1P30793 250 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 SLC6A9P48067 706 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 RGS6P49758 472 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 PRKXP51817 358 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 GGTLC2Q14390 218 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 TAF13Q15543 124 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 NKPD1Q17RQ9 610 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 ZNF718Q3SXZ3 478 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 MEPCEQ7L2J0 689 aaKnown RBP10.69□□□□□ -0.7
SKA1-203ENST00000417656 SLC16A9Q7RTY1 509 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 ZCCHC24Q8N2G6 241 aaKnown RBP10.69□□□□□ -0.7
SKA1-203ENST00000417656 OR8J1Q8NGP2 316 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 OTOSQ8NHW6 89 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 KLF14Q8TD94 323 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms