RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 LGALS12Q96DT0 336 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 MS4A3Q96HJ5 214 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 HS3ST6Q96QI5 342 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 COPS4Q9BT78 406 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 YIPF3Q9GZM5 350 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 HDHD2Q9H0R4 259 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 WNT5BQ9H1J7 359 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 C1orf198Q9H425 327 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 HAO2Q9NYQ3 351 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 CADP27708 2225 aa11.82□□□□□ -0.52
CPNE1-209ENST00000415920 ANK3Q12955 4377 aaKnown RBP11.81□□□□□ -0.52
CPNE1-209ENST00000415920 CSPG4Q6UVK1 2322 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 ZANQ9Y493 2812 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 RTTNQ86VV8 2226 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 IRGMA1A4Y4 181 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 ZNF878C9JN71 531 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 GOSR1O95249 250 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 APEX1P27695 318 aaKnown RBP11.81□□□□□ -0.52
CPNE1-209ENST00000415920 CXCR4P61073 352 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 PSG4Q00888 419 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 RAB40BQ12829 278 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 TEX30Q5JUR7 227 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 SEZ6L2Q6UXD5 910 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 VASH1Q7L8A9 365 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-209ENST00000415920 SYT9Q86SS6 491 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 ZNF540Q8NDQ6 660 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 OR52I1Q8NGK6 324 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 ST7LQ8TDW4 575 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 THEM6Q8WUY1 208 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 SLAMF6Q96DU3 332 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 MAP6Q96JE9 813 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 AMELYQ99218 206 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 ATF6BQ99941 703 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 KCNS3Q9BQ31 491 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 WACQ9BTA9 647 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 ABHD6Q9BV23 337 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 MOV10Q9HCE1 1003 aaKnown RBP11.81□□□□□ -0.52
CPNE1-209ENST00000415920 NGBQ9NPG2 151 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 CENPMQ9NSP4 180 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 SCN3BQ9NY72 215 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 B3GNT2Q9NY97 397 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 UBAP1Q9NZ09 502 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 IKZF2Q9UKS7 526 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 FBXL3Q9UKT7 428 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 TIMM10BQ9Y5J6 103 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 TMEM14AQ9Y6G1 99 aa11.81□□□□□ -0.52
CPNE1-209ENST00000415920 IGHV1-18A0A0C4DH31 117 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 EFCAB10A6NFE3 127 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 PSMD9O00233 223 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 PHYHO14832 338 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 CASKO14936 926 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 SMPD2O60906 423 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 FADS2O95864 444 aaKnown RBP11.8□□□□□ -0.52
CPNE1-209ENST00000415920 IGKV3-15P01624 115 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 CECR9P0C854 216 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 CBR1P16152 277 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 ZNF14P17017 642 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-209ENST00000415920 CCNOP22674 350 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 LOXP28300 417 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-209ENST00000415920 HSD11B1P28845 292 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 APLNRP35414 380 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 TAF13Q15543 124 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 PCK2Q16822 640 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 TBC1D28Q2M2D7 210 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 KLHL22Q53GT1 634 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 CCDC92Q53HC0 331 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-209ENST00000415920 ELFN2Q5R3F8 820 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 LRRN1Q6UXK5 716 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 SSX8Q7RTT4 187 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 SSX6Q7RTT6 188 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 ZNF584Q8IVC4 421 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 STX19Q8N4C7 294 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 SLC30A7Q8NEW0 376 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 OR10S1Q8NGN2 331 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 PIK3IP1Q96FE7 263 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 PERPQ96FX8 193 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 MNTQ99583 582 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 UBTD1Q9HAC8 227 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 CNOT2Q9NZN8 540 aaKnown RBP11.8□□□□□ -0.52
CPNE1-209ENST00000415920 BLOC1S6Q9UL45 172 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 LRCH1Q9Y2L9 728 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 PCDHGB1Q9Y5G3 927 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 DSCAMO60469 2012 aa11.8□□□□□ -0.52
CPNE1-209ENST00000415920 A0A1W2PQL4 384 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-209ENST00000415920 DAPL1A0PJW8 107 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 INAFM1C9JVW0 142 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 SYNGR3O43761 229 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 PTHP01270 115 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 IGHA1P01876 353 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 H2BFMP0C1H6 154 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 CCDC159P0C7I6 412 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 OR2T7P0C7T2 308 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 PIPP12273 146 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-209ENST00000415920 CCL2P13500 99 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 MYL12AP19105 171 aa11.79□□□□□ -0.52
CPNE1-209ENST00000415920 EEF1B2P24534 225 aaKnown RBP11.79□□□□□ -0.52
CPNE1-209ENST00000415920 STOMP27105 288 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms