RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 DYRK4Q9NR20 520 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 SLC17A7Q9P2U7 560 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 COPS3Q9UNS2 423 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 FLVCR2Q9UPI3 526 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 PYGO1Q9Y3Y4 419 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 U3KQA8 63 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 MYO15AQ9UKN7 3530 aa2.11□□□□□ -2.07
MCF2-204ENST00000414978 ASXL3Q9C0F0 2248 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 NCOA6Q14686 2063 aaPredicted RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 NSG1A0A0A6YYJ2 146 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 RPL37AP8A6NKH3 93 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 EFCAB7A8K855 629 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SMIM1B2RUZ4 78 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 KLRC4-KLRK1H3BQV0 150 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SMLR1H3BR10 107 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 NTN3O00634 580 aaPredicted RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 CCNB2O95067 398 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 HPP00738 406 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 HOXD4P09016 255 aaPredicted RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 CD3GP09693 182 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ADORA2BP29275 332 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 RBMXP38159 391 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 MRPL19P49406 292 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 GPM6AP51674 278 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CRISP1P54107 249 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 MFAP2P55001 183 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 HERV-K104P61576 105 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 REG3AQ06141 175 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZNF266Q14584 549 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CASP8Q14790 479 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 MS4A13Q5J8X5 152 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 PAGE2BQ5JRK9 111 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZNF57Q68EA5 555 aaPredicted RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 EMBQ6PCB8 327 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZFAND4Q86XD8 727 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 IQCF1Q8N6M8 205 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 C12orf29Q8N999 325 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 OR51L1Q8NGJ5 315 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CDC26Q8NHZ8 85 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 MPLKIPQ8TAP9 179 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SPPL2AQ8TCT8 520 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CPXM1Q96SM3 734 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 PKMYT1Q99640 499 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SYT15Q9BQS2 421 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 UTP23Q9BRU9 249 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 PLCXD1Q9NUJ7 323 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 STARD10Q9Y365 291 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 AKAP9Q99996 3911 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZZEF1O43149 2961 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 DMDP11532 3685 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 F8VP50 259 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 RDH16O75452 317 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SEMA3DO95025 777 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 C1orf105O95561 183 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SLPIP03973 132 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 IFNW1P05000 195 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 KRT7P08729 469 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CCDC166P0CW27 439 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ATF6P18850 670 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 IMPDH1P20839 514 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 WARSP23381 471 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 RBM34P42696 430 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 KIR3DL2P43630 455 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 EFNB2P52799 333 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 OGDHQ02218 1023 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 PDIA2Q13087 525 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZNF718Q3SXZ3 478 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 VPS26BQ4G0F5 336 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 XP32Q5T750 250 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 OR52E8Q6IFG1 317 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 REEP3Q6NUK4 255 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 MICU2Q8IYU8 434 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 TMEM86AQ8N2M4 240 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 METTL27Q8N6F8 245 aaPredicted RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 PRELID2Q8N945 189 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 AENQ8WTP8 325 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 MS4A4EQ96PG1 132 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 PELOQ9BRX2 385 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 TRIM51Q9BSJ1 452 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 MED10Q9BTT4 135 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 HCAR1Q9BXC0 346 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ANKRD19PQ9H560 264 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 MTHFD2LQ9H903 347 aaPredicted RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 THAP10Q9P2Z0 257 aaPredicted RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 CYTH4Q9UIA0 394 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZNF221Q9UK13 617 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 DHRS7Q9Y394 339 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 URB1O60287 2271 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 CEP295Q9C0D2 2601 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 A0A1W2PQ72 361 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SLC5A10A0PJK1 596 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 F6UB75 175 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 RAD51BO15315 384 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 OR10H3O60404 316 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZMPSTE24O75844 475 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 MYO1DO94832 1006 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 RAB3DO95716 219 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 LMO2P25791 158 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SDC4P31431 198 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 COILP38432 576 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms