RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ZNF679Q8IYX0 411 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 NUDT9Q9BW91 350 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 DHCR7Q9UBM7 475 aaKnown RBP13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 RNH1P13489 461 aaKnown RBP13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 NPY4RP50391 375 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 EGR3Q06889 387 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 RSPO4Q2I0M5 234 aaPredicted RBP13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 CLEC9AQ6UXN8 241 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 INO80EQ8NBZ0 244 aaPredicted RBP13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 UPB1Q9UBR1 384 aa13.06□□□□□ -0.32
SEMA3F-202ENST00000413852 SHISA8B8ZZ34 492 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 CRYBA1P05813 215 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC2A1P11166 492 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 CXCR1P25024 350 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 ARRB1P49407 418 aaPredicted RBP13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 UNC119Q13432 240 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 TDGQ13569 410 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 LYG2Q86SG7 212 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 ZSCAN4Q8NAM6 433 aaPredicted RBP13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 RNF128Q8TEB7 428 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 HERVK_113Q902F9 699 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 C8orf44Q96CB5 159 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 DUSP15Q9H1R2 295 aaPredicted RBP13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 OR5AC2Q9NZP5 309 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 GNRH1P01148 92 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 AGTR1P30556 359 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 SHISA6Q6ZSJ9 500 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 COX15Q7KZN9 410 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 DCXRQ7Z4W1 244 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 PAQR4Q8N4S7 273 aaPredicted RBP13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 DEFB119Q8N690 84 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 OR51F2Q8NH61 342 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 KCNK7Q9Y2U2 307 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 ASXL3Q9C0F0 2248 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 DOCK8Q8NF50 2099 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 PRSS37A4D1T9 235 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 RCC1P18754 421 aaPredicted RBP13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 NTSR1P30989 418 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 HHEXQ03014 270 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 NKAPLQ5M9Q1 402 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 FNDC7Q5VTL7 733 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC18B1Q6NT16 456 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 RBMS3Q6XE24 437 aaKnown RBP13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 RXFP4Q8TDU9 374 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 CRB3Q9BUF7 120 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 UBQLN4Q9NRR5 601 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 CKLFQ9UBR5 152 aa13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 GDF2Q9UK05 429 aaPredicted RBP13.05□□□□□ -0.32
SEMA3F-202ENST00000413852 C9JQL5 133 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 OR2F2O95006 317 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 EFNA3P52797 238 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 OR2F1Q13607 317 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC16A13Q7RTY0 426 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 ADGRE4PQ86SQ3 457 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC25A21Q9BQT8 299 aaPredicted RBP13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 RNF126Q9BV68 326 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 EMC6Q9BV81 110 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 ALX4Q9H161 411 aaPredicted RBP13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 BANF2Q9H503 90 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF629Q9UEG4 869 aaPredicted RBP13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 PCOLCE2Q9UKZ9 415 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 MED19A0JLT2 244 aaPredicted RBP13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 PNMTP11086 282 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 CD1CP29017 333 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 RAB13P51153 203 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 RIDAP52758 137 aaKnown RBP13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 CCINQ13939 588 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 ISXQ2M1V0 245 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 ARHGEF39Q8N4T4 335 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 FOXRED1Q96CU9 486 aaPredicted RBP13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 NUDT22Q9BRQ3 303 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 CHMP1AQ9HD42 196 aaPredicted RBP13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 MED29Q9NX70 200 aa13.04□□□□□ -0.32
SEMA3F-202ENST00000413852 RAB27BO00194 218 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 EFSO43281 561 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF217O75362 1048 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 HTR3BO95264 441 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 BGLAPP02818 100 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 GFOD2Q3B7J2 385 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF528Q3MIS6 628 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC25A42Q86VD7 318 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 CATSPERDQ86XM0 798 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC43A2Q8N370 569 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 PTPMT1Q8WUK0 201 aaPredicted RBP13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 MRGPRX1Q96LB2 322 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF587Q96SQ5 575 aaPredicted RBP13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 PIGMQ9H3S5 423 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 GSKIPQ9P0R6 139 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 PCDH15Q96QU1 1955 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 A0A1B0GTQ1 180 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 SDCBPO00560 298 aaPredicted RBP13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF432O94892 652 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 NR0B1P51843 470 aaKnown RBP13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 TMEM92Q6UXU6 159 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 OOSP2Q86WS3 158 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC26A10Q8NG04 563 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 OR13C9Q8NGT0 318 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 PIK3IP1Q96FE7 263 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms