RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 IGHV3-64DA0A0J9YX35 117 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 PRSS37A4D1T9 235 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 SRRM5B3KS81 715 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 FSTL3O95633 263 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 NPPAP01160 153 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 YAP1P46937 504 aaKnown RBP13.96□□□□□ -0.17
MRPL55-220ENST00000411464 PITPNBP48739 271 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 RAG2P55895 527 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 BPIFB3P59826 476 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 SELENOWP63302 87 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 SRSF4Q08170 494 aaKnown RBP13.96□□□□□ -0.17
MRPL55-220ENST00000411464 TRAM2Q15035 370 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 TTMPQ5BVD1 217 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 GPR157Q5UAW9 335 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 FBXW12Q6X9E4 464 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 BRD3OSQ6XYD6 125 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 MOGAT3Q86VF5 341 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 RNF113BQ8IZP6 322 aaKnown RBP13.96□□□□□ -0.17
MRPL55-220ENST00000411464 KIR3DL3Q8N743 410 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 WFDC12Q8WWY7 111 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 LZICQ8WZA0 190 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 DACT3Q96B18 629 aaPredicted RBP13.96□□□□□ -0.17
MRPL55-220ENST00000411464 ATP6V1G3Q96LB4 118 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 CCT8L2Q96SF2 557 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 NDEL1Q9GZM8 345 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 PRDM13Q9H4Q3 707 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 INTS9Q9NV88 658 aaKnown RBP13.96□□□□□ -0.17
MRPL55-220ENST00000411464 PDP1Q9P0J1 537 aaPredicted RBP13.96□□□□□ -0.17
MRPL55-220ENST00000411464 RHCGQ9UBD6 479 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 ASH2LQ9UBL3 628 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 CLN8Q9UBY8 286 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 ADAM18Q9Y3Q7 739 aa13.96□□□□□ -0.17
MRPL55-220ENST00000411464 VWFP04275 2813 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 OR6C6A6NF89 314 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 H0YL77 283 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 IFNW1P05000 195 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 CD14P08571 375 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 IRF2P14316 349 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 CTLA4P16410 223 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 FGF12P61328 243 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 LSM6P62312 80 aaKnown RBP13.95□□□□□ -0.18
MRPL55-220ENST00000411464 ZNF181Q2M3W8 571 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 ZNF404Q494X3 552 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 FIP1L1Q6UN15 594 aaKnown RBP13.95□□□□□ -0.18
MRPL55-220ENST00000411464 ZNF730Q6ZMV8 503 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 GLB1L2Q8IW92 636 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 APOBEC3DQ96AK3 386 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-220ENST00000411464 Q96M85 177 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 ZNF570Q96NI8 536 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 NOX4Q9NPH5 578 aa13.95□□□□□ -0.18
MRPL55-220ENST00000411464 F5H5P2 479 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 FXYD1O00168 92 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 RER1O15258 196 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 SLC16A7O60669 478 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 KHDRBS3O75525 346 aaKnown RBP13.94□□□□□ -0.18
MRPL55-220ENST00000411464 DBHP09172 617 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 FUT4P22083 530 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 ZBED5Q49AG3 693 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 CCDC92Q53HC0 331 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-220ENST00000411464 MESTQ5EB52 335 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 COQ5Q5HYK3 327 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 OTPQ5XKR4 325 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 OLFML2AQ68BL7 652 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 BRICD5Q6PL45 260 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 Q6YL49 198 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 RRM2BQ7LG56 351 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 OFCC1Q8IZS5 231 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 FITM2Q8N6M3 262 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 FAM156AQ8NDB6 213 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 BHLHE23Q8NDY6 225 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 OR2T12Q8NG77 320 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 ACOT11Q8WXI4 607 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-220ENST00000411464 SLC30A2Q9BRI3 323 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 SIKE1Q9BRV8 207 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 MARCH7Q9H992 704 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 TMEM100Q9NV29 134 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 KIF17Q9P2E2 1029 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 ATPIF1Q9UII2 106 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 COA3Q9Y2R0 106 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-220ENST00000411464 POLR1DQ9Y2S0 133 aa13.94□□□□□ -0.18
MRPL55-220ENST00000411464 TANC2Q9HCD6 1990 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 M0QZ24 198 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 MRASO14807 208 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 PHYHO14832 338 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 FAM201AQ5SY85 155 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 WDR25Q64LD2 544 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-220ENST00000411464 TBPL2Q6SJ96 375 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 DCDC5Q6ZRR9 648 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 TMPRSS11FQ6ZWK6 438 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 MBOAT2Q6ZWT7 520 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 FAM71F1Q96KD3 344 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-220ENST00000411464 PCGF1Q9BSM1 259 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 HCAR1Q9BXC0 346 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 SYT4Q9H2B2 425 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 NMNAT1Q9HAN9 279 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-220ENST00000411464 MRGBPQ9NV56 204 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 GID8Q9NWU2 228 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 C1RLQ9NZP8 487 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 SNX13Q9Y5W8 968 aa13.93□□□□□ -0.18
MRPL55-220ENST00000411464 A0A087WUU8 490 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms