RNA–Protein interactions for RNA: ENST00000411265.1

RNU6-1001P-201, Transcript of RNA, U6 small nuclear 1001, pseudogene, humanhuman

BASIC

Gene RNU6-1001P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1001P-201ENST00000411265 GFERP55789 205 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SLC25A11Q02978 314 aaKnown RBP0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 BIKQ13323 160 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 KRTAP21-3Q3LHN1 58 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CCDC152Q4G0S7 254 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ERO1BQ86YB8 467 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 STEAP2Q8NFT2 490 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 OR1L6Q8NGR2 347 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 OR10G6Q8NH81 332 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CMTM2Q8TAZ6 248 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 HGDQ93099 445 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 PKNOX2Q96KN3 472 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 C12orf42Q96LP6 360 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ZFP3Q96NJ6 502 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 GGTLC1Q9BX51 225 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CWH43Q9H720 699 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 LIN28AQ9H9Z2 209 aaKnown RBP0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CTNNA3Q9UI47 895 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ANKRD12Q6UB98 2062 aa0.77□□□□□ -2.29
RNU6-1001P-201ENST00000411265 HMCN1Q96RW7 5635 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ATP10AO60312 1499 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 C15orf38-AP3S2A0A0A6YYH1 394 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ARHGEF35A5YM69 484 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 GOLGA6L4A6NEF3 574 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 C4orf51C9J302 202 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 KRBOX1C9JBD0 128 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 NVLO15381 856 aaKnown RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 NUPL2O15504 423 aaKnown RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CNMDO75829 334 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CLPXO76031 633 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 GLSO94925 669 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CLIC3O95833 236 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 IGLV2-8P01709 118 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SERPIND1P05546 499 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ACSM4P0C7M7 580 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ZNF35P13682 527 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ETS2P15036 469 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 TCP1P17987 556 aaKnown RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 FOXN2P32314 431 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CDH6P55285 790 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SEC61GP60059 68 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 POLR2FP61218 127 aaKnown RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 RPL23P62829 140 aaKnown RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 PRR3P79522 188 aaKnown RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 DMC1Q14565 340 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 OR7A5Q15622 319 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SP6Q3SY56 376 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 C6orf226Q5I0X4 101 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SOHLH1Q5JUK2 328 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SLC25A24Q6NUK1 477 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 DEGS2Q6QHC5 323 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SPNS3Q6ZMD2 512 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ZSCAN30Q86W11 494 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 GTPBP8Q8N3Z3 284 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 MS4A15Q8N5U1 240 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CSGALNACT2Q8N6G5 542 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CHST4Q8NCG5 386 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 OR11H7Q8NGC8 314 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 OR1S2Q8NGQ3 325 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 OR1J4Q8NGS1 313 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ZNF502Q8TBZ5 544 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SLC7A13Q8TCU3 470 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 TMEM230Q96A57 120 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 TMEM159Q96B96 161 aa0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 LSM7Q9UK45 103 aaKnown RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 YARS2Q9Y2Z4 477 aaKnown RBP0.76□□□□□ -2.29
RNU6-1001P-201ENST00000411265 ZBED9Q6R2W3 1325 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 IGLV1-36A0A0B4J1U3 117 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 BTBD17A6NE02 478 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 OR52A4PA6NMU1 304 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 LRRIQ3A6PVS8 624 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 D6RAR5 112 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 NDUFC2-KCTD14E9PQ53 114 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 PRAMEF26H0Y7S4 382 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 GATBO75879 557 aaKnown RBP0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SCELO95171 688 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CRYGBP07316 175 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 INAFM2P0DMQ5 153 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 GGT1P19440 569 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 NTF3P20783 257 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 KITLGP21583 273 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CHMLP26374 656 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 GPX4P36969 197 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 TALDO1P37837 337 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 RBM34P42696 430 aaKnown RBP0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CRYBB2P43320 205 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 CCNHP51946 323 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 UBE2E1P51965 193 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 BPIFB3P59826 476 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 KRTAP12-1P59990 96 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 SIGLEC14Q08ET2 396 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 RCAN2Q14206 197 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 KLHL12Q53G59 568 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 UBE2UQ5VVX9 321 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 APOBEC3HQ6NTF7 200 aaKnown RBP0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 PMF1Q6P1K2 205 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 TMEM150AQ86TG1 271 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 EGFL6Q8IUX8 553 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 OR2Z1Q8NG97 314 aa0.75□□□□□ -2.29
RNU6-1001P-201ENST00000411265 PLPPR1Q8TBJ4 325 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms