RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 FPR2P25090 351 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 IFNGR2P38484 337 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 FXYD6P3P58550 94 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 SPIBQ01892 262 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 SEC23BQ15437 767 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 SPRNQ5BIV9 151 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 FBXW12Q6X9E4 464 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 MUC20Q8N307 709 aaPredicted RBP12.44□□□□□ -0.42
CBX3-203ENST00000409747 FAM86B1Q8N7N1 296 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 ITLN1Q8WWA0 313 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 SLC7A6Q92536 515 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 PYURFQ96I23 114 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 ERMAPQ96PL5 475 aaPredicted RBP12.44□□□□□ -0.42
CBX3-203ENST00000409747 OR2V2Q96R30 315 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 FUZQ9BT04 418 aa12.44□□□□□ -0.42
CBX3-203ENST00000409747 PPP1R3DO95685 299 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 CPT2P23786 658 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 FPR3P25089 353 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 CDKN2AP42771 156 aaKnown RBP12.43□□□□□ -0.42
CBX3-203ENST00000409747 COMPP49747 757 aaPredicted RBP12.43□□□□□ -0.42
CBX3-203ENST00000409747 HIST1H3AP68431 136 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 RFX4Q33E94 735 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 HIST2H3PS2Q5TEC6 136 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 HIST2H3AQ71DI3 136 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 LRRC28Q86X40 367 aaPredicted RBP12.43□□□□□ -0.42
CBX3-203ENST00000409747 RNF148Q8N7C7 305 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 ATG16L2Q8NAA4 619 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 OR13G1Q8NGZ3 307 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 POP5Q969H6 163 aaKnown RBP12.43□□□□□ -0.42
CBX3-203ENST00000409747 ZNF582Q96NG8 517 aaPredicted RBP12.43□□□□□ -0.42
CBX3-203ENST00000409747 SLC6A7Q99884 636 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 OR52D1Q9H346 318 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 NTN4Q9HB63 628 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 PATZ1Q9HBE1 687 aaKnown RBP12.43□□□□□ -0.42
CBX3-203ENST00000409747 PTTG3PQ9NZH4 202 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 POLR3KQ9Y2Y1 108 aaPredicted RBP12.43□□□□□ -0.42
CBX3-203ENST00000409747 V9GYQ6 96 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 NBEAL1Q6ZS30 2694 aa12.43□□□□□ -0.42
CBX3-203ENST00000409747 ARPC3O15145 178 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 FSHBP01225 129 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 DBHP09172 617 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 HSD17B1P14061 328 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 SELEP16581 610 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 NOS3P29474 1203 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 MDH2P40926 338 aaKnown RBP12.42□□□□□ -0.42
CBX3-203ENST00000409747 SRP9P49458 86 aaKnown RBP12.42□□□□□ -0.42
CBX3-203ENST00000409747 COX10Q12887 443 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 ZMYND11Q15326 602 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 SLC36A3Q495N2 470 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 ESCO2Q56NI9 601 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 SAMD4BQ5PRF9 694 aaKnown RBP12.42□□□□□ -0.42
CBX3-203ENST00000409747 LEG1Q6P5S2 330 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 OR8G5Q8NG78 346 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 GCDHQ92947 438 aaPredicted RBP12.42□□□□□ -0.42
CBX3-203ENST00000409747 DCAF16Q9NXF7 216 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 OPN4Q9UHM6 478 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 LHFPL6Q9Y693 200 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 IGLV1-36A0A0B4J1U3 117 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 A8MXK9 166 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 IDH3BO43837 385 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 OR10H3O60404 316 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 SEMG1P04279 462 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 MMP16P51512 607 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 ECH1Q13011 328 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 HLXQ14774 488 aaPredicted RBP12.42□□□□□ -0.42
CBX3-203ENST00000409747 ARMCX4Q5H9R4 360 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 OTPQ5XKR4 325 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.42□□□□□ -0.42
CBX3-203ENST00000409747 OR5AS1Q8N127 324 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 ZMYND19Q96E35 227 aaPredicted RBP12.42□□□□□ -0.42
CBX3-203ENST00000409747 NSMCE2Q96MF7 247 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 TSSK2Q96PF2 358 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 SIGLEC11Q96RL6 698 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 GPA33Q99795 319 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 MRI1Q9BV20 369 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 IFT27Q9BW83 186 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 HCAR1Q9BXC0 346 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 FAM107BQ9H098 131 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 GCM1Q9NP62 436 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 OR5V1Q9UGF6 321 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 B9D1Q9UPM9 204 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 LRCH1Q9Y2L9 728 aa12.42□□□□□ -0.42
CBX3-203ENST00000409747 WNK2Q9Y3S1 2297 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 F5H0A9 414 aaPredicted RBP12.41□□□□□ -0.42
CBX3-203ENST00000409747 TMEM178BH3BS89 294 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 ATP8B1O43520 1251 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 SNX3O60493 162 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 FABP3P05413 133 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 ZFP36P26651 326 aaKnown RBP12.41□□□□□ -0.42
CBX3-203ENST00000409747 CFPP27918 469 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 SLC6A9P48067 706 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 ERFP50548 548 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 MEP1BQ16820 701 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 OR2T2Q6IF00 324 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 RBMS3Q6XE24 437 aaKnown RBP12.41□□□□□ -0.42
CBX3-203ENST00000409747 CPLX4Q7Z7G2 160 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 PGAM4Q8N0Y7 254 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 OR6V1Q8N148 313 aa12.41□□□□□ -0.42
CBX3-203ENST00000409747 SLC26A10Q8NG04 563 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms