RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 PITX2Q99697 317 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 REG4Q9BYZ8 158 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 POFUT1Q9H488 388 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 GSX1Q9H4S2 264 aaPredicted RBP26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 KRT84Q9NSB2 600 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 SLCO1C1Q9NYB5 712 aa26.67■■□□□ 1.86
TRAF3IP1-203ENST00000409739 H3BNX3 289 aa26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 MITFO75030 526 aaPredicted RBP26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 NAT2P11245 290 aa26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PAICSP22234 425 aaKnown RBP26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 GCH1P30793 250 aa26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 KDM4DQ6B0I6 523 aa26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 TMEM154Q6P9G4 183 aa26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 BIVMQ86UB2 503 aa26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PTP4A1Q93096 173 aa26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 OTULINQ96BN8 352 aa26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 DCLRE1CQ96SD1 692 aaKnown RBP26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 MYOZ1Q9NP98 299 aaPredicted RBP26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 OAZ3Q9UMX2 235 aa26.66■■□□□ 1.86
TRAF3IP1-203ENST00000409739 CSPG4Q6UVK1 2322 aa26.65■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ENTPD1P49961 510 aa26.65■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PDLIM4P50479 330 aa26.65■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PCK2Q16822 640 aa26.65■■□□□ 1.86
TRAF3IP1-203ENST00000409739 KRTAP27-1Q3LI81 207 aa26.65■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PLBD1Q6P4A8 553 aa26.65■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ATF6BQ99941 703 aa26.65■■□□□ 1.86
TRAF3IP1-203ENST00000409739 HINT3Q9NQE9 182 aaKnown RBP26.65■■□□□ 1.86
TRAF3IP1-203ENST00000409739 GPR160Q9UJ42 338 aa26.65■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PRR23D1E9PI22 279 aaPredicted RBP26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 PRR23D2P0DMB1 279 aaPredicted RBP26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 BLVRAP53004 296 aa26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ESRRGP62508 458 aa26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 RSPO1Q2MKA7 263 aaPredicted RBP26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 ZFP1Q6P2D0 407 aa26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 MAPK1IP1LQ8NDC0 245 aa26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 OR10S1Q8NGN2 331 aa26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 SNX33Q8WV41 574 aa26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 GTF3AQ92664 365 aaKnown RBP26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 RAB3IPQ96QF0 476 aaPredicted RBP26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 TEX12Q9BXU0 123 aa26.64■■□□□ 1.86
TRAF3IP1-203ENST00000409739 A0A096LNT2 108 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 GLCEO94923 617 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 SPARCP09486 303 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 DAOP14920 347 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 ECH1Q13011 328 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 PTGES3Q15185 160 aaKnown RBP26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 PLEKHA8Q96JA3 519 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 PKP2Q99959 881 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 OR51V1Q9H2C8 321 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 TMEFF2Q9UIK5 374 aaPredicted RBP26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 STARD10Q9Y365 291 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 ABCA1O95477 2261 aa26.63■■□□□ 1.85
TRAF3IP1-203ENST00000409739 TANC2Q9HCD6 1990 aa26.62■■□□□ 1.85
TRAF3IP1-203ENST00000409739 SAC3D1A6NKF1 404 aa26.62■■□□□ 1.85
TRAF3IP1-203ENST00000409739 J3QW42 95 aa26.62■■□□□ 1.85
TRAF3IP1-203ENST00000409739 ZNF593O00488 134 aaPredicted RBP26.62■■□□□ 1.85
TRAF3IP1-203ENST00000409739 SLC25A16P16260 332 aa26.62■■□□□ 1.85
TRAF3IP1-203ENST00000409739 RGS6P49758 472 aa26.62■■□□□ 1.85
TRAF3IP1-203ENST00000409739 TEX30Q5JUR7 227 aa26.62■■□□□ 1.85
TRAF3IP1-203ENST00000409739 DCXRQ7Z4W1 244 aa26.62■■□□□ 1.85
TRAF3IP1-203ENST00000409739 CPOQ8IVL8 374 aa26.62■■□□□ 1.85
TRAF3IP1-203ENST00000409739 C17orf100A8MU93 164 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 NCR1O76036 304 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 TUBG1P23258 451 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 IGFBP5P24593 272 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 EPHA2P29317 976 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 CARTPTQ16568 116 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 MOGQ16653 247 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 CIB1Q99828 191 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 MARCH7Q9H992 704 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 TUBG2Q9NRH3 451 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 DDX28Q9NUL7 540 aaKnown RBP26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 TVP23BQ9NYZ1 205 aa26.61■■□□□ 1.85
TRAF3IP1-203ENST00000409739 LOC390937A0A1W2PQ73 354 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 NDUFS8O00217 210 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 ACSM4P0C7M7 580 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 GSTT1P30711 240 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 MMP15P51511 669 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 PPP2R2BQ00005 443 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 PSG7Q13046 419 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 SNAPC1Q16533 368 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 ERI1Q8IV48 349 aaKnown RBP26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 BBS1Q8NFJ9 593 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 UBASH3BQ8TF42 649 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 APOBEC3DQ96AK3 386 aaPredicted RBP26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 COG8Q96MW5 612 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 INTS14Q96SY0 518 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 PIMREGQ9BSJ6 248 aa26.6■■□□□ 1.85
TRAF3IP1-203ENST00000409739 VWC2LB2RUY7 222 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 F5H5K5 113 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 PRODHO43272 600 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 HPXP02790 462 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 SLC2A5P22732 501 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 MAGEB1P43366 347 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 KLHL12Q53G59 568 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 CLEC9AQ6UXN8 241 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 CXXC5Q7LFL8 322 aaKnown RBP26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 OR6N2Q8NGY6 317 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 ST7LQ8TDW4 575 aa26.59■■□□□ 1.85
TRAF3IP1-203ENST00000409739 ZMYND19Q96E35 227 aaPredicted RBP26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms