RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 GLAP06280 429 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 PHYHD1Q5SRE7 291 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 OR51J1Q9H342 316 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 NUBP2Q9Y5Y2 271 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 OR2M5A3KFT3 312 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 GPR171O14626 319 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 PI4KAP42356 2102 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 FAM58AQ8N1B3 248 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 APH1BQ8WW43 257 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 PLEKHF2Q9H8W4 249 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ZNF346Q9UL40 294 aaKnown RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SLC2A10O95528 541 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 OPRK1P41145 380 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 TFPI2P48307 235 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ZMAT1Q5H9K5 638 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 CPZQ66K79 652 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 PRSS48Q7RTY5 328 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 GDF7Q7Z4P5 450 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 C15orf54Q8N8G6 183 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ZNF583Q96ND8 569 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 BCL7BQ9BQE9 202 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SEMA4GQ9NTN9 838 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 MYO5AQ9Y4I1 1855 aaKnown RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 LRIT2A6NDA9 550 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SPINK4O60575 86 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 CTNSO60931 367 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 MMP7P09237 267 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 TAGLN2P37802 199 aaKnown RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 OPRL1P41146 370 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 PSMB3P49720 205 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 CCR6P51684 374 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 PTTG1IPP53801 180 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 TLE4Q04727 773 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 GGTLC2Q14390 218 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SIX1Q15475 284 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 DHRS7BQ6IAN0 325 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ADAMTSL4Q6UY14 1074 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SLC7A5P1Q8MH63 180 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 NUP37Q8NFH4 326 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 KIRREL1Q96J84 757 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 GPR78Q96P69 363 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 LTB4R2Q9NPC1 389 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 COA4Q9NYJ1 87 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 FBXL4Q9UKA2 621 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SPTBP11277 2137 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SDHBP21912 280 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 H3F3AP84243 136 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 PLPP6Q8IY26 295 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ENTHD1Q8IYW4 607 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 OR2T11Q8NH01 316 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 RPEQ96AT9 228 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 STACQ99469 402 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 DCAF13Q9NV06 445 aaKnown RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ARHGAP33O14559 1287 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SLC16A6O15403 523 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 CACNG3O60359 315 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 HOXC13P31276 330 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ALKBH1Q13686 389 aaKnown RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 OR13J1Q8NGT2 312 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 WBP2Q969T9 261 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ZNF764Q96H86 408 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 TMPRSS13Q9BYE2 586 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 GLTPQ9NZD2 209 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 LRP5LA4QPB2 252 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 NAP1L6A6NFF2 107 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 DCTN6O00399 190 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 NME2P1O60361 137 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 HYAL1Q12794 435 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 PYCR3Q53H96 274 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ANKRD13BQ86YJ7 626 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SLC22A24Q8N4F4 322 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 CHCHD4Q8N4Q1 142 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 ISYNA1Q9NPH2 558 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 WDR37Q9Y2I8 494 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 LAMA4Q16363 1823 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 TUBAL3A6NHL2 446 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 CYTIPO60759 359 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 SNCGO76070 127 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 SIX6O95475 246 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 COX6B1P14854 86 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 EMDP50402 254 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 MS4A2Q01362 244 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 OR1L4Q8NGR5 311 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 PCGF1Q9BSM1 259 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 BCO1Q9HAY6 547 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 SPACA1Q9HBV2 294 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 ICAM5Q9UMF0 924 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 MTCL1Q9Y4B5 1905 aaKnown RBP7.65□□□□□ -1.18
SCN9A-203ENST00000409672 SCN9AQ15858 1988 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 CCDC187A0A096LP49 1063 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 TRBV23-1A0A0A0MS06 115 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 ZNHIT1O43257 154 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 TIGD3Q6B0B8 471 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 SEZ6L2Q6UXD5 910 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 MBOAT2Q6ZWT7 520 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 RTN4RL1Q86UN2 441 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-203ENST00000409672 ADAMTS5Q9UNA0 930 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 MYOFQ9NZM1 2061 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 DSCR3O14972 297 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 FURINP09958 794 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms