RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 RPA2P15927 270 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 HMGA2P52926 109 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 SNTB2Q13425 540 aaKnown RBP10.15□□□□□ -0.78
SNX13-202ENST00000409604 GALEQ14376 348 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 CHRFAM7AQ494W8 412 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 RFLNBQ8N5W9 214 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 NOXO1Q8NFA2 376 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 TIMM10BQ9Y5J6 103 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 U3KQA8 63 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 HS3ST1O14792 307 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 FZD7O75084 574 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 ERCC1P07992 297 aaPredicted RBP10.15□□□□□ -0.78
SNX13-202ENST00000409604 TMIGD3P0DMS9 266 aaPredicted RBP10.15□□□□□ -0.78
SNX13-202ENST00000409604 EDDM3BP56851 147 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 CLPPQ16740 277 aaPredicted RBP10.15□□□□□ -0.78
SNX13-202ENST00000409604 Q499Y3 187 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 BRICD5Q6PL45 260 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 TMEM205Q6UW68 189 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 MKXQ8IYA7 352 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 WDSUB1Q8N9V3 476 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 BEST4Q8NFU0 473 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 OR1J1Q8NGS3 322 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 CAPSLQ8WWF8 208 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 FCAMRQ8WWV6 532 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 ASB17Q8WXJ9 295 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 HINT2Q9BX68 163 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 TINAGQ9UJW2 476 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 COPS3Q9UNS2 423 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 ADAMTS9Q9P2N4 1935 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.15□□□□□ -0.78
SNX13-202ENST00000409604 SPRY3O43610 288 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 EPPINO95925 133 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 TNFSF8P32971 234 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 ZNF93P35789 620 aaPredicted RBP10.15□□□□□ -0.78
SNX13-202ENST00000409604 CDK5Q00535 292 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 NHLH1Q02575 133 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 IKZF1Q13422 519 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 ZNF679Q8IYX0 411 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 SLC43A2Q8N370 569 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 DERL3Q96Q80 235 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 COMMD9Q9P000 198 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 ZNF69Q9UC07 566 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 LRP12Q9Y561 859 aa10.15□□□□□ -0.78
SNX13-202ENST00000409604 AKR1C4P17516 323 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 MAP2K6P52564 334 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 LTBQ06643 244 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 GTPBP8Q8N3Z3 284 aaPredicted RBP10.14□□□□□ -0.79
SNX13-202ENST00000409604 LSMEM1Q8N8F7 131 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 OR13F1Q8NGS4 319 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 RDH5Q92781 318 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 ZNF764Q96H86 408 aaPredicted RBP10.14□□□□□ -0.79
SNX13-202ENST00000409604 OR10A4Q9H209 315 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 DENND4CQ5VZ89 1909 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 TRANK1O15050 2925 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 THY1P04216 161 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 SCG5P05408 212 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 TBC1D28Q2M2D7 210 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 SSX6Q7RTT6 188 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 OR5L1Q8NGL2 311 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 OR2G2Q8NGZ5 317 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 CST11Q9H112 138 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 BET1O15155 118 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 AMY2AP04746 511 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 MAP2K3P46734 347 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 PITPNAQ00169 270 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 PCGF3Q3KNV8 242 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 ZNF684Q5T5D7 378 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 CCDC107Q8WV48 283 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 IMMP1LQ96LU5 166 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 POTEKPQ9BYX7 375 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 GABARAPL1Q9H0R8 117 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 MED28Q9H204 178 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 SP140LQ9H930 580 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 LIN7BQ9HAP6 207 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 PMF1-BGLAPU3KQ54 211 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 HEATR5AQ86XA9 2040 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 A1L4Q6 167 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 WRBO00258 174 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 LIMS3P0CW19 117 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 LIMS4P0CW20 117 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 SRMP19623 302 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 GABRA5P31644 462 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 NUP62P37198 522 aaPredicted RBP10.14□□□□□ -0.79
SNX13-202ENST00000409604 RBM39Q14498 530 aaKnown RBP10.14□□□□□ -0.79
SNX13-202ENST00000409604 OR8B8Q15620 311 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 FIP1L1Q6UN15 594 aaKnown RBP10.14□□□□□ -0.79
SNX13-202ENST00000409604 BEND4Q6ZU67 534 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 SPACA3Q8IXA5 215 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 IQCF2Q8IXL9 164 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 C20orf196Q8IYI0 205 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 ZNF565Q8N9K5 539 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 CSNK2A3Q8NEV1 391 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 OR10AC1Q8NH08 325 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 FBXW5Q969U6 566 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 PELI1Q96FA3 418 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 FAM234AQ9H0X4 552 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 OPN3Q9H1Y3 402 aaPredicted RBP10.14□□□□□ -0.79
SNX13-202ENST00000409604 NRIP3Q9NQ35 241 aa10.14□□□□□ -0.79
SNX13-202ENST00000409604 NOP16Q9Y3C1 178 aaKnown RBP10.14□□□□□ -0.79
SNX13-202ENST00000409604 LTBP2Q14767 1821 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms