RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 PNRC2Q9NPJ4 139 aaKnown RBP11.8□□□□□ -0.52
VPREB1-202ENST00000403807 TUBG2Q9NRH3 451 aa11.8□□□□□ -0.52
VPREB1-202ENST00000403807 CENPMQ9NSP4 180 aa11.8□□□□□ -0.52
VPREB1-202ENST00000403807 NKX1-2Q9UD57 310 aaPredicted RBP11.8□□□□□ -0.52
VPREB1-202ENST00000403807 WARS2Q9UGM6 360 aaKnown RBP11.8□□□□□ -0.52
VPREB1-202ENST00000403807 NOTCH2Q04721 2471 aa11.8□□□□□ -0.52
VPREB1-202ENST00000403807 SPG11Q96JI7 2443 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 OVOL3O00110 214 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 MPZL2O60487 215 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 SELENOFO60613 162 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 NGFP01138 241 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 DBHP09172 617 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 GCH1P30793 250 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 NAA10P41227 235 aaPredicted RBP11.79□□□□□ -0.52
VPREB1-202ENST00000403807 SLC15A1P46059 708 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 SNRPGP62308 76 aaKnown RBP11.79□□□□□ -0.52
VPREB1-202ENST00000403807 SNRPD2P62316 118 aaKnown RBP11.79□□□□□ -0.52
VPREB1-202ENST00000403807 TMED1Q13445 227 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 MOGQ16653 247 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 MST1LQ2TV78 715 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 ZNF718Q3SXZ3 478 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 SLC25A30Q5SVS4 291 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 MEDAGQ5VYS4 303 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 TTC23Q5W5X9 447 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 C11orf71Q6IPW1 123 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 RHOUQ7L0Q8 258 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 ZNF101Q8IZC7 436 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 LRRC75A-AS1Q8N1F1 130 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 OR5L1Q8NGL2 311 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 OTOSQ8NHW6 89 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 SYNPRQ8TBG9 265 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 THEM6Q8WUY1 208 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 RFKQ969G6 155 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 UBE2FQ969M7 185 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 FOXC2Q99958 501 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 COPS4Q9BT78 406 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 ABHD6Q9BV23 337 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 YIPF3Q9GZM5 350 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 HAO2Q9NYQ3 351 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 DUSP13Q9UII6 198 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 LAMP5Q9UJQ1 280 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 HRNRQ86YZ3 2850 aaPredicted RBP11.79□□□□□ -0.52
VPREB1-202ENST00000403807 TACC2O95359 2948 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 TEX15Q9BXT5 2789 aa11.79□□□□□ -0.52
VPREB1-202ENST00000403807 TMEM129A0AVI4 362 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 SNTNA6NMZ2 147 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 ZNF878C9JN71 531 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 J3QW42 95 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 LYNP07948 512 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 PSKH1P11801 424 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 ZNF250P15622 560 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 PAX1P15863 534 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 HTR1FP30939 366 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 CDKN1AP38936 164 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 ART1P52961 327 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 ERVS71-1P61550 626 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 PPP1CBP62140 327 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 GRB2P62993 217 aaKnown RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 OCLNQ16625 522 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 RSPO1Q2MKA7 263 aaPredicted RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 KRTAP27-1Q3LI81 207 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 DHRSXQ8N5I4 330 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 OR10S1Q8NGN2 331 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 SLC25A40Q8TBP6 338 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 ST7LQ8TDW4 575 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 APOBEC3DQ96AK3 386 aaPredicted RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 Q96MT0 163 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 ZNF582Q96NG8 517 aaPredicted RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 CNN2Q99439 309 aaKnown RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 DOK1Q99704 481 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 KCNJ15Q99712 375 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 APOL4Q9BPW4 351 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 CACNG6Q9BXT2 260 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 MRPL37Q9BZE1 423 aaKnown RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 GSX2Q9BZM3 304 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 OR2J1Q9GZK6 312 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 DDX28Q9NUL7 540 aaKnown RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 ZNF701Q9NV72 531 aaPredicted RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 GPR160Q9UJ42 338 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 FZR1Q9UM11 496 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 TMEM14AQ9Y6G1 99 aa11.78□□□□□ -0.52
VPREB1-202ENST00000403807 RAI1Q7Z5J4 1906 aaPredicted RBP11.78□□□□□ -0.52
VPREB1-202ENST00000403807 DSCAMO60469 2012 aa11.77□□□□□ -0.52
VPREB1-202ENST00000403807 AKAP6Q13023 2319 aa11.77□□□□□ -0.52
VPREB1-202ENST00000403807 M0R135 149 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 DLGAP1O14490 977 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 APOC1P02654 83 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 MRPL3P09001 348 aaKnown RBP11.77□□□□□ -0.53
VPREB1-202ENST00000403807 H2BFMP0C1H6 154 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 ACSM4P0C7M7 580 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 HSD11B1P28845 292 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 ATP6V1E1P36543 226 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 PTH2RP49190 550 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 KLF3P57682 345 aaPredicted RBP11.77□□□□□ -0.53
VPREB1-202ENST00000403807 POU4F2Q12837 409 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 MSMPQ1L6U9 139 aa11.77□□□□□ -0.53
VPREB1-202ENST00000403807 MBNL2Q5VZF2 373 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms