RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 CGGBP1Q9UFW8 167 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-203ENST00000400772 ATPIF1Q9UII2 106 aa13.45□□□□□ -0.26
ATG4B-203ENST00000400772 TMEFF2Q9UIK5 374 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-203ENST00000400772 ZDHHC8Q9ULC8 765 aa13.45□□□□□ -0.26
ATG4B-203ENST00000400772 PRPF19Q9UMS4 504 aaKnown RBP13.45□□□□□ -0.26
ATG4B-203ENST00000400772 WIPI2Q9Y4P8 454 aa13.45□□□□□ -0.26
ATG4B-203ENST00000400772 CDH10Q9Y6N8 788 aa13.45□□□□□ -0.26
ATG4B-203ENST00000400772 ACOT8O14734 319 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 TIMM8AO60220 97 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-203ENST00000400772 GSTM3P21266 225 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 THBS2P35442 1172 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 GGT2P36268 569 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 RBMXP38159 391 aaKnown RBP13.44□□□□□ -0.26
ATG4B-203ENST00000400772 HFEQ30201 348 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 SLC18B1Q6NT16 456 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 PGM2L1Q6PCE3 622 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 LINC00346Q8IVM7 164 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 LINC00471Q8N535 108 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 ZNRF4Q8WWF5 429 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 CCL17Q92583 94 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 PTP4A1Q93096 173 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 ELMOD3Q96FG2 381 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 DCLRE1CQ96SD1 692 aaKnown RBP13.44□□□□□ -0.26
ATG4B-203ENST00000400772 COQ7Q99807 217 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 MRPL22Q9NWU5 206 aaKnown RBP13.44□□□□□ -0.26
ATG4B-203ENST00000400772 POLR1DQ9Y2S0 133 aa13.44□□□□□ -0.26
ATG4B-203ENST00000400772 ATRQ13535 2644 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 DEAF1O75398 565 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-203ENST00000400772 HLXQ14774 488 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-203ENST00000400772 MICAQ29983 383 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 FAM98BQ52LJ0 330 aaKnown RBP13.43□□□□□ -0.26
ATG4B-203ENST00000400772 OR2T5Q6IEZ7 315 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 CFAP77Q6ZQR2 320 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 RASSF6Q6ZTQ3 369 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 CYB561A3Q8NBI2 242 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 AQP11Q8NBQ7 271 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 OR2T29Q8NH02 315 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 ASB9Q96DX5 294 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 DIRC2Q96SL1 478 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 EGLN1Q9GZT9 426 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 HDHD2Q9H0R4 259 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 ZNF665Q9H7R5 613 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 LPAR2Q9HBW0 351 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 PNRC2Q9NPJ4 139 aaKnown RBP13.43□□□□□ -0.26
ATG4B-203ENST00000400772 DCAF16Q9NXF7 216 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 CYB5R1Q9UHQ9 305 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 U3KQV3 271 aa13.43□□□□□ -0.26
ATG4B-203ENST00000400772 CLDN25C9JDP6 229 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 J3QW42 95 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 PHF1O43189 567 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-203ENST00000400772 MSMBP08118 114 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 HNF1AP20823 631 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 PYCR1P32322 319 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 RGS6P49758 472 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 TNFAIP6P98066 277 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-203ENST00000400772 ZMAT1Q5H9K5 638 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 RPL13AP3Q6NVV1 102 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 FBXW12Q6X9E4 464 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 COLCA1Q6ZS62 124 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 OR52L1Q8NGH7 329 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 OR4Q3Q8NH05 313 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 TMEM186Q96B77 213 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 CCDC124Q96CT7 223 aaKnown RBP13.42□□□□□ -0.26
ATG4B-203ENST00000400772 COG8Q96MW5 612 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 THTPAQ9BU02 230 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 DGCR6LQ9BY27 220 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 HIF1ANQ9NWT6 349 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 PTTG3PQ9NZH4 202 aa13.42□□□□□ -0.26
ATG4B-203ENST00000400772 SAMHD1Q9Y3Z3 626 aaKnown RBP13.42□□□□□ -0.26
ATG4B-203ENST00000400772 RNF212BA8MTL3 300 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 PSKH1P11801 424 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 RAC2P15153 192 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 SRSF2Q01130 221 aaKnown RBP13.41□□□□□ -0.26
ATG4B-203ENST00000400772 SLC36A3Q495N2 470 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 NAA40Q86UY6 237 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 GLCCI1Q86VQ1 547 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 PHC2Q8IXK0 858 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 ADGRG5Q8IZF4 528 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 LNX2Q8N448 690 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 SLC37A3Q8NCC5 494 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 OR2Z1Q8NG97 314 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 RAB1CQ92928 201 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 APOBEC3DQ96AK3 386 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-203ENST00000400772 MAP6Q96JE9 813 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 CHID1Q9BWS9 393 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 CDADC1Q9BWV3 514 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 TSSK6Q9BXA6 273 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 C1QTNF5Q9BXJ0 243 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 REEP1Q9H902 201 aa13.41□□□□□ -0.26
ATG4B-203ENST00000400772 COL6A5A8TX70 2615 aa13.4□□□□□ -0.26
ATG4B-203ENST00000400772 F5H5K5 113 aa13.4□□□□□ -0.26
ATG4B-203ENST00000400772 SOX14O95416 240 aa13.4□□□□□ -0.26
ATG4B-203ENST00000400772 IGHV2-5P01817 119 aa13.4□□□□□ -0.26
ATG4B-203ENST00000400772 HLA-DQA2P01906 255 aa13.4□□□□□ -0.26
ATG4B-203ENST00000400772 ACSM4P0C7M7 580 aa13.4□□□□□ -0.26
ATG4B-203ENST00000400772 RAP2AP10114 183 aa13.4□□□□□ -0.26
ATG4B-203ENST00000400772 RPS27P42677 84 aaKnown RBP13.4□□□□□ -0.26
ATG4B-203ENST00000400772 TRAP1Q12931 704 aaKnown RBP13.4□□□□□ -0.26
ATG4B-203ENST00000400772 OR2T2Q6IF00 324 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms