RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CLN3Q13286 438 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 OR8G1Q15617 311 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 PCK2Q16822 640 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 OR51H1Q8NH63 302 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 TTC9Q92623 222 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 PBOV1Q9GZY1 135 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 B9D1Q9UPM9 204 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 ADAMTS7Q9UKP4 1686 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 KIR2DS1A0A191URI9 304 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 GLI4P10075 376 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 KIR2DS4P43632 304 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 FZD2Q14332 565 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 KIR2DS1Q14954 304 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 C2orf76Q3KRA6 126 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 KANSL1Q7Z3B3 1105 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF808Q8N4W9 903 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-204ENST00000400337 OR10J5Q8NHC4 309 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 RNF141Q8WVD5 230 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 JAM3Q9BX67 310 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 GPATCH2Q9NW75 528 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 BRWD1Q9NSI6 2320 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 TMEM200CA6NKL6 621 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 C17orf112F2Z3M2 114 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 CD160O95971 181 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 CSF3P09919 207 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 EVX1P49640 407 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 TMEM92Q6UXU6 159 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF547Q8IVP9 402 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 KCNE4Q8WWG9 221 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 TRIB1Q96RU8 372 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 NKX6-3A6NJ46 265 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 COL9A1P20849 921 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 FAAP20Q6NZ36 180 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 PRSS41Q7RTY9 318 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 GABRG1Q8N1C3 465 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 SPACA9Q96E40 222 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-204ENST00000400337 SLCO1B1Q9Y6L6 691 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 DRD3P35462 400 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
COL18A1-204ENST00000400337 KCNJ15Q99712 375 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 ATPIF1Q9UII2 106 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 LRRC30A6NM36 301 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF628Q5EBL2 1059 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 OR10K2Q6IF99 312 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 OR2G2Q8NGZ5 317 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 KTI12Q96EK9 354 aaPredicted RBP16.47■□□□□ 0.23
COL18A1-204ENST00000400337 RPS10-NUDT3A0A1W2PQS6 291 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 HOXB3P14651 431 aaPredicted RBP16.47■□□□□ 0.23
COL18A1-204ENST00000400337 RPS10P46783 165 aaKnown RBP16.47■□□□□ 0.23
COL18A1-204ENST00000400337 SHBQ15464 509 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 FAM27D1Q5T7N8 215 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 LAIR1Q6GTX8 287 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 PLXDC2Q6UX71 529 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 A0A087WUJ7 227 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 KRBOX1C9JBD0 128 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 TLE4Q04727 773 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 SEH1LQ96EE3 360 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 HIPK2Q9H2X6 1198 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 PLEKHF2Q9H8W4 249 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 TMEM9BQ9NQ34 198 aa16.47■□□□□ 0.23
COL18A1-204ENST00000400337 RGS11O94810 467 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 NRASP01111 189 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 UBE2KP61086 200 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 PRSS36Q5K4E3 855 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 CREB3L2Q70SY1 520 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 SFTPA1Q8IWL2 248 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 INTS12Q96CB8 462 aaKnown RBP16.46■□□□□ 0.23
COL18A1-204ENST00000400337 SUCNR1Q9BXA5 334 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 SPACA1Q9HBV2 294 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 SLC39A9Q9NUM3 307 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 RAB27BO00194 218 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 CNR1P21554 472 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 TFAP2EQ6VUC0 442 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 TMEM200AQ86VY9 491 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 OR6K3Q8NGY3 331 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 MAFAQ8NHW3 353 aaPredicted RBP16.46■□□□□ 0.23
COL18A1-204ENST00000400337 NUDCD2Q8WVJ2 157 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 ROBO4Q8WZ75 1007 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 EDEM2Q9BV94 578 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 HEYLQ9NQ87 328 aaPredicted RBP16.46■□□□□ 0.23
COL18A1-204ENST00000400337 IGHV5-51A0A0C4DH38 117 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 CBR3O75828 277 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF266Q14584 549 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 OR51A4Q8NGJ6 313 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF2Q9BSG1 426 aaPredicted RBP16.46■□□□□ 0.23
COL18A1-204ENST00000400337 GDF2Q9UK05 429 aaPredicted RBP16.46■□□□□ 0.23
COL18A1-204ENST00000400337 HDGFL3Q9Y3E1 203 aa16.46■□□□□ 0.23
COL18A1-204ENST00000400337 SDCBPO00560 298 aaPredicted RBP16.46■□□□□ 0.22
COL18A1-204ENST00000400337 NKX2-2O95096 273 aa16.46■□□□□ 0.22
COL18A1-204ENST00000400337 B4GALT1P15291 398 aa16.46■□□□□ 0.22
COL18A1-204ENST00000400337 SCCPDHQ8NBX0 429 aa16.46■□□□□ 0.22
COL18A1-204ENST00000400337 PXT1Q8NFP0 134 aa16.46■□□□□ 0.22
COL18A1-204ENST00000400337 CADM4Q8NFZ8 388 aa16.46■□□□□ 0.22
COL18A1-204ENST00000400337 OR52H1Q8NGJ2 320 aa16.46■□□□□ 0.22
COL18A1-204ENST00000400337 OR4Q3Q8NH05 313 aa16.46■□□□□ 0.22
COL18A1-204ENST00000400337 OR4C3Q8NH37 302 aa16.46■□□□□ 0.22
COL18A1-204ENST00000400337 ANKUB1A6NFN9 424 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 C4orf47A7E2U8 309 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 ARR3P36575 388 aa16.45■□□□□ 0.22
COL18A1-204ENST00000400337 ZNF92Q03936 586 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms