RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 COL19A1Q14993 1142 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 PHYHD1Q5SRE7 291 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 GRINAQ7Z429 371 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 LACC1Q8IV20 430 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 C11orf54Q9H0W9 315 aaPredicted RBP12.53□□□□□ -0.4
VAPA-202ENST00000400000 SLC2A8Q9NY64 477 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 CLEC1BQ9P126 229 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 SLC22A13Q9Y226 551 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 K7EQM0 130 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 LAP3P28838 519 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 C4orf17Q53FE4 359 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 OR4F5Q8NH21 305 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 ZFAND2BQ8WV99 257 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 ALKBH3Q96Q83 286 aaPredicted RBP12.52□□□□□ -0.4
VAPA-202ENST00000400000 OR4F4Q96R69 305 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 PLEKHF2Q9H8W4 249 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 ADAM29Q9UKF5 820 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 MMACHCQ9Y4U1 282 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 CSAG2Q9Y5P2 127 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 CROCCQ5TZA2 2017 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 SLCO2B1O94956 709 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 SOD1P00441 154 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 SRFP11831 508 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 SLC25A6P12236 298 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 CSN1S1P47710 185 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 CDC34P49427 236 aaPredicted RBP12.52□□□□□ -0.4
VAPA-202ENST00000400000 TCTN3Q6NUS6 607 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 GUSBP11Q6P575 273 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 GPR32P1Q8NGA4 272 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 RPP25Q9BUL9 199 aaKnown RBP12.52□□□□□ -0.4
VAPA-202ENST00000400000 SLC17A4Q9Y2C5 497 aa12.52□□□□□ -0.4
VAPA-202ENST00000400000 SCG5P05408 212 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 POU3F3P20264 500 aaPredicted RBP12.52□□□□□ -0.41
VAPA-202ENST00000400000 BMP5P22003 454 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 PKMYT1Q99640 499 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 PSORS1C1Q9UIG5 152 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 RAB22AQ9UL26 194 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 SLC22A20A6NK97 555 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 ZNF205O95201 554 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 NRASP01111 189 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 DUSP1P28562 367 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 MRPS10P82664 201 aaKnown RBP12.52□□□□□ -0.41
VAPA-202ENST00000400000 ACTBL2Q562R1 376 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 KCTD11Q693B1 232 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 TERB2Q8NHR7 220 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 SLC35B4Q969S0 331 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 CPNE5Q9HCH3 593 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 CRYAAP02489 173 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 RBP2P50120 134 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 PMP22Q01453 160 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 TAF9Q16594 264 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 ZMAT1Q5H9K5 638 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 TMEM81Q6P7N7 255 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 OR5B3Q8NH48 314 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 NANPQ8TBE9 248 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 CA5BP1Q8WTZ4 195 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 NT5DC2Q9H857 520 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 FLVCR2Q9UPI3 526 aa12.52□□□□□ -0.41
VAPA-202ENST00000400000 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.41
VAPA-202ENST00000400000 HMGN4O00479 90 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 PPIHO43447 177 aaKnown RBP12.51□□□□□ -0.41
VAPA-202ENST00000400000 EXOSC3Q9NQT5 275 aaKnown RBP12.51□□□□□ -0.41
VAPA-202ENST00000400000 ZNF724A8MTY0 619 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 CASP3P42574 277 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 CDC20BQ86Y33 519 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 KCNRGQ8N5I3 272 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 GOLT1BQ9Y3E0 138 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 GFYI3L273 518 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 RBP4P02753 201 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 OR11G2Q8NGC1 345 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 ISL2Q96A47 359 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 AKR1E2Q96JD6 320 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 IER2Q9BTL4 223 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 PLA2G2FQ9BZM2 168 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 ABLIM3O94929 683 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 GOSR1O95249 250 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 TCRBP04435 133 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 CTSLP07711 333 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 ELAVL1Q15717 326 aaKnown RBP12.51□□□□□ -0.41
VAPA-202ENST00000400000 RTL8BQ17RB0 113 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 WIPI1Q5MNZ9 446 aaPredicted RBP12.51□□□□□ -0.41
VAPA-202ENST00000400000 GDPGP1Q6ZNW5 385 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 LRRC56Q8IYG6 542 aaPredicted RBP12.51□□□□□ -0.41
VAPA-202ENST00000400000 APH1BQ8WW43 257 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 PDLIM5Q96HC4 596 aaKnown RBP12.51□□□□□ -0.41
VAPA-202ENST00000400000 FCRL1Q96LA6 429 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 S1PR3Q99500 378 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 TMPRSS13Q9BYE2 586 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 OR52A5Q9H2C5 316 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 ASB1Q9Y576 335 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 TMPRSS11DO60235 418 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 PSMB1P20618 241 aaKnown RBP12.51□□□□□ -0.41
VAPA-202ENST00000400000 LIPNQ5VXI9 398 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 C20orf196Q8IYI0 205 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 PXT1Q8NFP0 134 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 OR2M2Q96R28 347 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 SDF2Q99470 211 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 ZNF785A8K8V0 405 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms