RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SNU13P55769 128 aaKnown RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SEC61A1P61619 476 aaKnown RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 RASGEF1BQ0VAM2 473 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SLC9A3R2Q15599 337 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM244Q5VVB8 128 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM225Q6GV28 225 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 FAM199XQ6PEV8 388 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 TSSK4Q6SA08 328 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 RAB11FIP2Q7L804 512 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 THAP6Q8TBB0 222 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 NUDCD2Q8WVJ2 157 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 C8orf44Q96CB5 159 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 VSTM2LQ96N03 204 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 CHST6Q9GZX3 395 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 MLXQ9UH92 298 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 HHLA2Q9UM44 414 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 A0A0G2JMZ2 1700 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM272A0A1B0GTI8 110 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 LOC107986453A0A1B0GWG9 222 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 TNFSF12O43508 249 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 EIF4E2O60573 245 aaKnown RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF41P51814 821 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ELP2Q6IA86 826 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 OR2G2Q8NGZ5 317 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 C15orf40Q8WUR7 153 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ST8SIA4Q92187 359 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 RGP1Q92546 391 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PGAM5Q96HS1 289 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SLC46A1Q96NT5 459 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SPACA5Q96QH8 159 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PRR13Q9NZ81 148 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF254O75437 659 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 CFDP00746 253 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ENPP1P22413 925 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 GPR3P46089 330 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 SGCBQ16585 318 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 LGALSLQ3ZCW2 172 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PHF19Q5T6S3 580 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ARL5BQ96KC2 179 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 GFI1Q99684 422 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 ST6GALNAC5Q9BVH7 336 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 GSKIPQ9P0R6 139 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 PCDHB10Q9UN67 800 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 MMACHCQ9Y4U1 282 aa4.45□□□□□ -1.7
SMAD4-202ENST00000398417 FREM3P0C091 2139 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 C7orf66A4D0T2 115 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CBY3A6NI87 242 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF217O75362 1048 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 PMP2P02689 132 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CD27P26842 260 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SFTPDP35247 375 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 BTN1A1Q13410 526 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SSX2Q16385 188 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TCEAL6Q6IPX3 200 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 DNM1P34Q6PK57 102 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 ZNF704Q6ZNC4 412 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 FAM57BQ71RH2 274 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 LRRC75AQ8NAA5 344 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SCARB1Q8WTV0 552 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 DDIT4LQ96D03 193 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 LINC00052Q96N35 136 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 VRK1Q99986 396 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 OCSTAMPQ9BR26 566 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 PCDHGA5Q9Y5G8 931 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 OR14I1A6ND48 311 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 FRG2CA6NGY1 282 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TOR1AO14656 332 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 DHRS3O75911 302 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 NDUFB6O95139 128 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 FAM157BP0CG42 384 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CXCL2P19875 107 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CCR5P51681 352 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 POLR2HP52434 150 aaKnown RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 DLX5P56178 289 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SRYQ05066 204 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 GLYATL3Q5SZD4 288 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 GSG1LQ6UXU4 331 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 ZBTB44Q8NCP5 570 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 OR2AK2Q8NG84 335 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 OR10K1Q8NGX5 313 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CMBLQ96DG6 245 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 GPR137Q96N19 417 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 DEFB126Q9BYW3 111 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 FOXQ1Q9C009 403 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SELENOIQ9C0D9 397 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 FN3KRPQ9HA64 309 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 METTL12A8MUP2 240 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SULT1C2O00338 296 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 SEC14L5O43304 696 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 FOLR1P15328 257 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 CCNOP22674 350 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TLE3Q04726 772 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 FUT7Q11130 342 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 FZD5Q13467 585 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 IL10RAQ13651 578 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 COL13A1Q5TAT6 717 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-202ENST00000398417 LANCL3Q6ZV70 420 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 MCEMP1Q8IX19 187 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 TMEM234Q8WY98 164 aa4.44□□□□□ -1.7
SMAD4-202ENST00000398417 ABHD6Q9BV23 337 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms