RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 LRP4O75096 1905 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 PTPRTO14522 1441 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 GAKO14976 1311 aa1.66□□□□□ -2.14
CD47-203ENST00000398258 IGHV3OR16-9A0A0B4J2B5 98 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 CIB4A0PJX0 185 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 PDZK1P1A8MUH7 402 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 ZNF99A8MXY4 864 aaPredicted RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 SUPT3HB4E1H0 165 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 TRDMT1O14717 391 aaKnown RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 SOCS1O15524 211 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 AKR7A2O43488 359 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 SPAG7O75391 227 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 GCM2O75603 506 aaPredicted RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 FCN3O75636 299 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 YIF1AO95070 293 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 HPRT1P00492 218 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 DCNP07585 359 aaKnown RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 CD3GP09693 182 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 CISD3P0C7P0 127 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 UBCP0CG48 685 aaKnown RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 ERGP11308 486 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 GZMAP12544 262 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 GGT1P19440 569 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 RAB3AP20336 220 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 U2AF2P26368 475 aaKnown RBP eCLIP1.65□□□□□ -2.155e-11■■■■■ 31.2
CD47-203ENST00000398258 LONP1P36776 959 aaKnown RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 SYNJ2BPP57105 145 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 VSX2P58304 361 aaPredicted RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 DAOAP59103 153 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 RAB11AP62491 216 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 CDH17Q12864 832 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 IFT88Q13099 833 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 EBI3Q14213 229 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 RAB11BQ15907 218 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 RPEL1Q2QD12 228 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 ZNF691Q5VV52 312 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 GPR107Q5VW38 600 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 PLCXD3Q63HM9 321 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 H3F3CQ6NXT2 135 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 DNAJC24Q6P3W2 148 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 PLET1Q6UQ28 207 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 TMEM205Q6UW68 189 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 ZFP2Q6ZN57 461 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 BHLHA15Q7RTS1 189 aaPredicted RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 WDR86Q86TI4 376 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 ZFP41Q8N8Y5 198 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 CHST4Q8NCG5 386 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 UBALD1Q8TB05 177 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 C15orf40Q8WUR7 153 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 EEF1AKMT3Q96AZ1 226 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 NRBF2Q96F24 287 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 BTN2A3PQ96KV6 586 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 RNF145Q96MT1 663 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 FOPNLQ96NB1 174 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 SAMD10Q9BYL1 202 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 SLC7A5P2Q9GIP4 190 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 C12orf10Q9HB07 376 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 CD209Q9NNX6 404 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 HMG20AQ9NP66 347 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 CCNB1IP1Q9NPC3 277 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 MRPL22Q9NWU5 206 aaKnown RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 AHSPQ9NZD4 102 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 TET2Q6N021 2002 aaPredicted RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 GPATCH8Q9UKJ3 1502 aaKnown RBP1.65□□□□□ -2.15
CD47-203ENST00000398258 UBN2Q6ZU65 1347 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 IGSF9BQ9UPX0 1349 aa1.65□□□□□ -2.15
CD47-203ENST00000398258 PALLDQ8WX93 1383 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 ZNF705GA8MUZ8 300 aaPredicted RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 TEX46H3BTG2 121 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 H7C417 338 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 DNASE2O00115 360 aaPredicted RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 BPY2O14599 106 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 SLC9A3R1O14745 358 aaPredicted RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 ZNF324O75467 553 aaPredicted RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 GABARAPO95166 117 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 WISP3O95389 354 aaPredicted RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 IGKV3-11P04433 115 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 IFNW1P05000 195 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 RALBP11234 206 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 PSMC3P17980 439 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 PGAM1P18669 254 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 FABP6P51161 128 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 UBE2NP61088 152 aaKnown RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 PPP1CBP62140 327 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 RPS15AP62244 130 aaKnown RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 LRRC63Q05C16 580 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 SYCNQ0VAF6 134 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 TRMT5Q32P41 509 aaKnown RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 NKAIN1Q4KMZ8 207 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 ORMDL2Q53FV1 153 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 TFDP3Q5H9I0 405 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 TPTE2P1Q5T6R2 138 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 KHDRBS2Q5VWX1 349 aaKnown RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 METTL21CQ5VZV1 264 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 WDR82Q6UXN9 313 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 ABHD12BQ7Z5M8 362 aaPredicted RBP1.64□□□□□ -2.15
CD47-203ENST00000398258 PGAM4Q8N0Y7 254 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 LRRC75AQ8NAA5 344 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 OR10G2Q8NGC3 310 aa1.64□□□□□ -2.15
CD47-203ENST00000398258 OR10W1Q8NGF6 305 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms