RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 FNDC9Q8TBE3 224 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 SARAFQ96BY9 339 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 ABHD1Q96SE0 405 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 MRI1Q9BV20 369 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 PRDM14Q9GZV8 571 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 PTTG3PQ9NZH4 202 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 FLVCR1Q9Y5Y0 555 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 IGLV1-36A0A0B4J1U3 117 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 A0A1B0GTH9 108 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 PAHP00439 452 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 CENPAP49450 140 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 ETFDHQ16134 617 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 DNM1P34Q6PK57 102 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 ANKRD11Q6UB99 2663 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 RNF128Q8TEB7 428 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 SNX33Q8WV41 574 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 OR2M2Q96R28 347 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 BEX2Q9BXY8 128 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 PLSCR3Q9NRY6 295 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 MCUBQ9NWR8 336 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 ZNF407Q9C0G0 2248 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 ANKRD34BA5PLL1 514 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 LANCL1O43813 399 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 AQP8O94778 261 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 ALX3O95076 343 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 BTCP35070 178 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 NAA10P41227 235 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 DYRK1AQ13627 763 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 SLC25A35Q3KQZ1 300 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 SLC36A2Q495M3 483 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 CEP78Q5JTW2 689 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 THEM4Q5T1C6 240 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 FAM180AQ6UWF9 173 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 RPTNQ6XPR3 784 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 KDF1Q8NAX2 398 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 SMAP2Q8WU79 429 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 ING1Q9UK53 422 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 BOLA1Q9Y3E2 137 aa17.1■□□□□ 0.33
PDLIM2-204ENST00000397760 ALPK2Q86TB3 2170 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 IGKV1D-43A0A0B4J1Z2 117 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 TVP23AA6NH52 213 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 PDCD5O14737 125 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 ZNHIT1O43257 154 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 EEF1E1O43324 174 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 SELENOFO60613 162 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 GPANK1O95872 356 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 RPS11P62280 158 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 TP53I3Q53FA7 332 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 KCTD20Q7Z5Y7 419 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 TOMM5Q8N4H5 51 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 YIPF5Q969M3 257 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 FOXN4Q96NZ1 517 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 KLHL9Q9P2J3 617 aa17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 COA3Q9Y2R0 106 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-204ENST00000397760 KHDRBS3O75525 346 aaKnown RBP17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 ZNF432O94892 652 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 HLA-DQA2P01906 255 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 SELENOPP49908 381 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 RIPPLY1Q0D2K3 151 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 HIST3H3Q16695 136 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 Q5BKY6 102 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 ZNF767PQ75MW2 155 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 TMEM123Q8N131 208 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 Q8NA96 180 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 OR6N1Q8NGY5 312 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 NSMAFQ92636 917 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 GPR137Q96N19 417 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 ACTR6Q9GZN1 396 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 PRORYQ9H606 182 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 EMC7Q9NPA0 242 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 GLTPQ9NZD2 209 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 EMC3Q9P0I2 261 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 RCE1Q9Y256 329 aa17.08■□□□□ 0.33
PDLIM2-204ENST00000397760 IGKV3D-15A0A087WSY6 115 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 TRBV2A0A0J9YWF9 115 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 GPR171O14626 319 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF780AO75290 641 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 ATF1P18846 271 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 NTF4P34130 210 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 CSNK1A1P48729 337 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 BLVRAP53004 296 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 HCCSP53701 268 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 GLO1Q04760 184 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 UBE2NLQ5JXB2 153 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 CD276Q5ZPR3 534 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 AAED1Q7RTV5 226 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 TIGD4Q8IY51 512 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 MCHR2Q969V1 340 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 MED28Q9H204 178 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 GHITMQ9H3K2 345 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 OR14I1A6ND48 311 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 SLC22A20A6NK97 555 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 TPPPO94811 219 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 QDPRP09417 244 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 NR2C1P13056 603 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 RNPS1Q15287 305 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 THOC7Q6I9Y2 204 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 SLC16A9Q7RTY1 509 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 MCEMP1Q8IX19 187 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 OR5M9Q8NGP3 310 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms