RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 POU5F2Q8N7G0 328 aa11.1□□□□□ -0.63
RPA3-202ENST00000396682 ATG16L2Q8NAA4 619 aa11.1□□□□□ -0.63
RPA3-202ENST00000396682 PCYOX1LQ8NBM8 494 aa11.1□□□□□ -0.63
RPA3-202ENST00000396682 COG8Q96MW5 612 aa11.1□□□□□ -0.63
RPA3-202ENST00000396682 ZNF570Q96NI8 536 aa11.1□□□□□ -0.63
RPA3-202ENST00000396682 TMEM246Q9BRR3 403 aa11.1□□□□□ -0.63
RPA3-202ENST00000396682 CMTM6Q9NX76 183 aa11.1□□□□□ -0.63
RPA3-202ENST00000396682 PTTG3PQ9NZH4 202 aa11.1□□□□□ -0.63
RPA3-202ENST00000396682 IL20RAQ9UHF4 553 aa11.1□□□□□ -0.63
RPA3-202ENST00000396682 COA3Q9Y2R0 106 aaPredicted RBP11.1□□□□□ -0.63
RPA3-202ENST00000396682 TRAV40A0A0B4J280 105 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 POM121CA8CG34 1229 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 XKRYO14609 159 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 SLC16A7O60669 478 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 GPANK1O95872 356 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 RPS2P15880 293 aaKnown RBP11.09□□□□□ -0.63
RPA3-202ENST00000396682 SELEP16581 610 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 OMGP23515 440 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 PMELP40967 661 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 LSM6P62312 80 aaKnown RBP11.09□□□□□ -0.63
RPA3-202ENST00000396682 DEFA6Q01524 100 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 SF3A3Q12874 501 aaKnown RBP eCLIP11.09□□□□□ -0.63
RPA3-202ENST00000396682 KRR1Q13601 381 aaKnown RBP11.09□□□□□ -0.63
RPA3-202ENST00000396682 ZBED5Q49AG3 693 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 PDLIM3Q53GG5 364 aaPredicted RBP11.09□□□□□ -0.63
RPA3-202ENST00000396682 FAM201AQ5SY85 155 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 CGB2Q6NT52 195 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 LRRN1Q6UXK5 716 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 GLB1L2Q8IW92 636 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 OR8G5Q8NG78 346 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 RAB40AQ8WXH6 277 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 LZICQ8WZA0 190 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 SLITRK2Q9H156 845 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 RERGLQ9H628 205 aa11.09□□□□□ -0.63
RPA3-202ENST00000396682 NMNAT1Q9HAN9 279 aaPredicted RBP11.09□□□□□ -0.63
RPA3-202ENST00000396682 A0A1B0GWJ7 208 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 F5H5P2 479 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 J3QW42 95 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 IFNL4K9M1U5 179 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 PTP4A3O75365 173 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 KHDRBS3O75525 346 aaKnown RBP11.08□□□□□ -0.64
RPA3-202ENST00000396682 ZNF682O95780 498 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 CPT2P23786 658 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 SDHAP31040 664 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 MTNR1AP48039 350 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 FXYD6P3P58550 94 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 GNB2P62879 340 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 HIST1H3AP68431 136 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 RSPO1Q2MKA7 263 aaPredicted RBP11.08□□□□□ -0.64
RPA3-202ENST00000396682 ZNF404Q494X3 552 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 HIST2H3PS2Q5TEC6 136 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 SLC27A4Q6P1M0 643 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 BTNL3Q6UXE8 466 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 PTCHD4Q6ZW05 846 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 HIST2H3AQ71DI3 136 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 MOGAT3Q86VF5 341 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 SLC15A3Q8IY34 581 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 OR13G1Q8NGZ3 307 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 SLC7A13Q8TCU3 470 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 TMIGD2Q96BF3 282 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 RCN3Q96D15 328 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 NEIL1Q96FI4 390 aaPredicted RBP11.08□□□□□ -0.64
RPA3-202ENST00000396682 FAM46AQ96IP4 442 aaKnown RBP11.08□□□□□ -0.64
RPA3-202ENST00000396682 GPX7Q96SL4 187 aaPredicted RBP11.08□□□□□ -0.64
RPA3-202ENST00000396682 SLC30A2Q9BRI3 323 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 WDR76Q9H967 626 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 NRIP3Q9NQ35 241 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 GID8Q9NWU2 228 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 VSX1Q9NZR4 365 aaPredicted RBP11.08□□□□□ -0.64
RPA3-202ENST00000396682 MIOXQ9UGB7 285 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 ATPIF1Q9UII2 106 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 SIGLEC7Q9Y286 467 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 LHFPL6Q9Y693 200 aa11.08□□□□□ -0.64
RPA3-202ENST00000396682 KIR2DS1A0A191URI9 304 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 IQCF6A8MYZ5 107 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 DCTN6O00399 190 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 CXCR6O00574 342 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 HOXA3O43365 443 aaPredicted RBP11.07□□□□□ -0.64
RPA3-202ENST00000396682 FSTL3O95633 263 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 SRP9P49458 86 aaKnown RBP11.07□□□□□ -0.64
RPA3-202ENST00000396682 RGS6P49758 472 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 PRSS12P56730 875 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 HOXA4Q00056 320 aaPredicted RBP11.07□□□□□ -0.64
RPA3-202ENST00000396682 SRSF4Q08170 494 aaKnown RBP11.07□□□□□ -0.64
RPA3-202ENST00000396682 DBPQ10586 325 aaPredicted RBP11.07□□□□□ -0.64
RPA3-202ENST00000396682 MAPRE2Q15555 327 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 KCNMB1Q16558 191 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 MEP1BQ16820 701 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 ZNF181Q2M3W8 571 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 DEFB112Q30KQ8 113 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 IFI44LQ53G44 452 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 C16orf87Q6PH81 154 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 CORO6Q6QEF8 472 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 LYPD2Q6UXB3 125 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 BRD3OSQ6XYD6 125 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 CBLL1Q75N03 491 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 SPATC1Q76KD6 591 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 FITM2Q8N6M3 262 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 BHLHE23Q8NDY6 225 aa11.07□□□□□ -0.64
RPA3-202ENST00000396682 OR10S1Q8NGN2 331 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms