RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 HOXB5P09067 269 aa14.19□□□□□ -0.14
GNE-202ENST00000396594 CCL7P80098 99 aa14.19□□□□□ -0.14
GNE-202ENST00000396594 PTOV1Q86YD1 416 aa14.19□□□□□ -0.14
GNE-202ENST00000396594 OR13C8Q8NGS7 320 aa14.19□□□□□ -0.14
GNE-202ENST00000396594 ZNF707Q96C28 371 aaPredicted RBP14.19□□□□□ -0.14
GNE-202ENST00000396594 ATF1P18846 271 aa14.19□□□□□ -0.14
GNE-202ENST00000396594 PSMB3P49720 205 aa14.19□□□□□ -0.14
GNE-202ENST00000396594 ASTLQ6HA08 431 aaPredicted RBP14.19□□□□□ -0.14
GNE-202ENST00000396594 TMEM81Q6P7N7 255 aa14.19□□□□□ -0.14
GNE-202ENST00000396594 ZNF511Q8NB15 262 aa14.19□□□□□ -0.14
GNE-202ENST00000396594 HINT3Q9NQE9 182 aaKnown RBP14.19□□□□□ -0.14
GNE-202ENST00000396594 H7C1C5 153 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 CTDSP2O14595 271 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 TGM1P22735 817 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 MPLP40238 635 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 SMN1Q16637 294 aaKnown RBP14.18□□□□□ -0.14
GNE-202ENST00000396594 ISXQ2M1V0 245 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 ARRDC1Q8N5I2 433 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 ZNF485Q8NCK3 441 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 SLC6A17Q9H1V8 727 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 EXO1Q9UQ84 846 aaKnown RBP14.18□□□□□ -0.14
GNE-202ENST00000396594 SLCO1B1Q9Y6L6 691 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 SHISA7A6NL88 538 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 HOXD4P09016 255 aaPredicted RBP14.18□□□□□ -0.14
GNE-202ENST00000396594 HIST1H1CP16403 213 aaKnown RBP14.18□□□□□ -0.14
GNE-202ENST00000396594 S100A11P31949 105 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 ZIC1Q15915 447 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 ELP2Q6IA86 826 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 SIAH3Q8IW03 269 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 KISS1RQ969F8 398 aaPredicted RBP14.18□□□□□ -0.14
GNE-202ENST00000396594 WBP2Q969T9 261 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 ARRDC1-AS1Q9H2J1 176 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 SLCO1C1Q9NYB5 712 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 A0A0B4J2E0 115 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 A0A1B0GX12 115 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 RAB4BP61018 213 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 PCK2Q16822 640 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 ADGRG3Q86Y34 549 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 PNPLA1Q8N8W4 532 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 PHF1O43189 567 aaPredicted RBP14.18□□□□□ -0.14
GNE-202ENST00000396594 LALBAP00709 142 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 CDC20BQ86Y33 519 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 ZNF808Q8N4W9 903 aaPredicted RBP14.18□□□□□ -0.14
GNE-202ENST00000396594 SCARB1Q8WTV0 552 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 PBOV1Q9GZY1 135 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 RNF32Q9H0A6 362 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 ATP23Q9Y6H3 246 aa14.18□□□□□ -0.14
GNE-202ENST00000396594 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 IGHV1OR21-1A0A087WYE8 117 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 IGHV1OR15-9A0A0B4J2B8 117 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 PRKRAO75569 313 aaKnown RBP14.17□□□□□ -0.14
GNE-202ENST00000396594 CLDN1O95832 211 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 BPIFB3P59826 476 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 PRTGQ2VWP7 1150 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 RHBDD2Q6NTF9 364 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 CDH26Q8IXH8 852 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 MYOZ1Q9NP98 299 aaPredicted RBP14.17□□□□□ -0.14
GNE-202ENST00000396594 B9D1Q9UPM9 204 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 RPS10-NUDT3A0A1W2PQS6 291 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 OTOL1A6NHN0 477 aaPredicted RBP14.17□□□□□ -0.14
GNE-202ENST00000396594 HLA-DOBP13765 273 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 SIGLEC14Q08ET2 396 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 IAH1Q2TAA2 248 aaPredicted RBP14.17□□□□□ -0.14
GNE-202ENST00000396594 RGS7BPQ6MZT1 257 aaPredicted RBP14.17□□□□□ -0.14
GNE-202ENST00000396594 Q6ZRG5 221 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 LAX1Q8IWV1 398 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 REEP6Q96HR9 211 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 ZNF385DQ9H6B1 395 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 TMEM30AQ9NV96 361 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 IL20Q9NYY1 176 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 TRGV5A0A0B4J1U4 118 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 MC2RQ01718 297 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 BAXQ07812 192 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 CDC20Q12834 499 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 SCGB2A2Q13296 93 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 SLC9A3R2Q15599 337 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 KRBOX4Q5JUW0 171 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 ZNF626Q68DY1 528 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 WDR54Q9H977 334 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 OSGIN1Q9UJX0 560 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 MDFIC2A0A1B0GVS7 189 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 PTPN6P29350 595 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 BTG2P78543 158 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 SORDQ00796 357 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 B4GALNT1Q00973 533 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 C1orf210Q8IVY1 113 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 TMEM229BQ8NBD8 167 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 OR51F2Q8NH61 342 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 TRIB1Q96RU8 372 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 SUCNR1Q9BXA5 334 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 DUSP15Q9H1R2 295 aaPredicted RBP14.17□□□□□ -0.14
GNE-202ENST00000396594 PIGMQ9H3S5 423 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 KPTNQ9Y664 436 aa14.17□□□□□ -0.14
GNE-202ENST00000396594 A0A1B0GUH1 482 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 TUSC2O75896 110 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 ACTL6AO96019 429 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 FXNQ16595 210 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 SLC38A6Q8IZM9 456 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 FAM71CQ8NEG0 241 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 TEX37Q96LM6 180 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms