RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CGGBP1Q9UFW8 167 aaPredicted RBP15.47■□□□□ 0.07
FXN-203ENST00000396366 TMCC3Q9ULS5 477 aa15.47■□□□□ 0.07
FXN-203ENST00000396366 POLR1DQ9Y2S0 133 aa15.47■□□□□ 0.07
FXN-203ENST00000396366 WNK2Q9Y3S1 2297 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 LOC105371242A0A075B767 164 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 ARPC3O15145 178 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 PNPP00491 289 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 ATP6V1B2P21281 511 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 CRABP1P29762 137 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 SLC35F1Q5T1Q4 408 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 PGBD2Q6P3X8 592 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 C16orf89Q6UX73 402 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 LINC00346Q8IVM7 164 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 SDR9C7Q8NEX9 313 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 GJC3Q8NFK1 279 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 GNPDA2Q8TDQ7 276 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 RAB39BQ96DA2 213 aa15.46■□□□□ 0.07
FXN-203ENST00000396366 DCTN3O75935 186 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 VENTXO95231 258 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 RENP00797 406 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 SBK2P0C263 348 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 ADRA2CP18825 462 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 TUBG1P23258 451 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 PRSS12P56730 875 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 LCN2P80188 198 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 PPP1R8Q12972 351 aaKnown RBP15.45■□□□□ 0.06
FXN-203ENST00000396366 ZMAT1Q5H9K5 638 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 CLEC12AQ5QGZ9 265 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 OR2T2Q6IF00 324 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 DNM1P34Q6PK57 102 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 CFAP77Q6ZQR2 320 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 FITM2Q8N6M3 262 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 SLC26A10Q8NG04 563 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 OR9Q2Q8NGE9 314 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 OR52E2Q8NGJ4 325 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 ITLN1Q8WWA0 313 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 TMPRSS13Q9BYE2 586 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 WDR76Q9H967 626 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 TUBG2Q9NRH3 451 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 TMEM106BQ9NUM4 274 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 NPTNQ9Y639 398 aa15.45■□□□□ 0.06
FXN-203ENST00000396366 B2RBV5 119 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 H0YL77 283 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 IGHV2-70P01814 119 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 RAC2P15153 192 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 ZFP36P26651 326 aaKnown RBP15.44■□□□□ 0.06
FXN-203ENST00000396366 NOS3P29474 1203 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 SLC3A1Q07837 685 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 COX10Q12887 443 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 TSPAN31Q12999 210 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 SLC18B1Q6NT16 456 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 SHQ1Q6PI26 577 aaKnown RBP15.44■□□□□ 0.06
FXN-203ENST00000396366 ZNF620Q6ZNG0 422 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 NAA40Q86UY6 237 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 ZBTB46Q86UZ6 589 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 ZNRF4Q8WWF5 429 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 OR2V2Q96R30 315 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 COQ7Q99807 217 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 BTBD10Q9BSF8 475 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 LYVE1Q9Y5Y7 322 aa15.44■□□□□ 0.06
FXN-203ENST00000396366 IGHV3-64DA0A0J9YX35 117 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 GASTP01350 101 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 GGT2P36268 569 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 IFNGR2P38484 337 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 HMGA2P52926 109 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.43■□□□□ 0.06
FXN-203ENST00000396366 FBXW12Q6X9E4 464 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 PEG10Q86TG7 708 aaKnown RBP15.43■□□□□ 0.06
FXN-203ENST00000396366 ATG16L2Q8NAA4 619 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 CYB561A3Q8NBI2 242 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 OR10AD1Q8NGE0 317 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 OR4C15Q8NGM1 316 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 APOBEC3DQ96AK3 386 aaPredicted RBP15.43■□□□□ 0.06
FXN-203ENST00000396366 SIGLEC11Q96RL6 698 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 PLA2G12AQ9BZM1 189 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 HDHD2Q9H0R4 259 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 MRPL22Q9NWU5 206 aaKnown RBP15.43■□□□□ 0.06
FXN-203ENST00000396366 IL19Q9UHD0 177 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 PPP1R3CQ9UQK1 317 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 TENM1Q9UKZ4 2725 aa15.43■□□□□ 0.06
FXN-203ENST00000396366 A0A0G2JMP0 313 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 A0A0X1KG70 313 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 TCRBV5S2A0A599 114 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 F5H5K5 113 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 TNFRSF11BO00300 401 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 HLA-DQA2P01906 255 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 TNFRSF1AP19438 455 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 TNFSF4P23510 183 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 PYCR1P32322 319 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 RPS27P42677 84 aaKnown RBP15.42■□□□□ 0.06
FXN-203ENST00000396366 RGS6P49758 472 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 SEC61A1P61619 476 aaKnown RBP15.42■□□□□ 0.06
FXN-203ENST00000396366 MS4A2Q01362 244 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 ZMYND11Q15326 602 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 KRTAP27-1Q3LI81 207 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 ZNF362Q5T0B9 420 aaPredicted RBP15.42■□□□□ 0.06
FXN-203ENST00000396366 DCAF12L2Q5VW00 463 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 ZNF283Q8N7M2 679 aa15.42■□□□□ 0.06
FXN-203ENST00000396366 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.42■□□□□ 0.06
FXN-203ENST00000396366 BHLHE23Q8NDY6 225 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms