RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MEX3AA1L020 520 aaKnown RBP12.85□□□□□ -0.35
CLIP2-203ENST00000395060 MUC1P15941 1255 aaPredicted RBP12.85□□□□□ -0.35
CLIP2-203ENST00000395060 C5AR1P21730 350 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 CD80P33681 288 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 EBPQ15125 230 aaKnown RBP12.85□□□□□ -0.35
CLIP2-203ENST00000395060 AVPI1Q5T686 147 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 DNM1P46Q6ZS02 220 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 EXD3Q8N9H8 876 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 NIT2Q9NQR4 276 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 HIF3AQ9Y2N7 669 aa12.85□□□□□ -0.35
CLIP2-203ENST00000395060 A0A1B0GTI1 187 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 WIPF3A6NGB9 483 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 CD8AP01732 235 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 ACAA1P09110 424 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-203ENST00000395060 KIR2DS3Q14952 304 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 FAM209BQ5JX69 171 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 TMEM184AQ6ZMB5 413 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 RTL10Q7L3V2 364 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 COMMD2Q86X83 199 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 ZSCAN4Q8NAM6 433 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-203ENST00000395060 TMEM229BQ8NBD8 167 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 PHOSPHO2Q8TCD6 241 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 C1orf198Q9H425 327 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 PTGES2Q9H7Z7 377 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 UQCC1Q9NVA1 299 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 OR5AC2Q9NZP5 309 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 LRP12Q9Y561 859 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 FANCMQ8IYD8 2048 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 C5orf67F2Z3F1 127 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 H0YIG0 161 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 H0YIZ8 118 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 ZBTB25P24278 435 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 ADH6P28332 368 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 CD1CP29017 333 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 FOXL2P58012 376 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 ACKR1Q16570 336 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 BAP18Q8IXM2 172 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 STOML3Q8TAV4 291 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 FGGYQ96C11 551 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 MMABQ96EY8 250 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-203ENST00000395060 PIK3IP1Q96FE7 263 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 NICN1Q9BSH3 213 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 ABHD6Q9BV23 337 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 COA3Q9Y2R0 106 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-203ENST00000395060 EFCAB7A8K855 629 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 APOC1P02654 83 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 APODP05090 189 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 S100A6P06703 90 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 HOXB5P09067 269 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 PSMB6P28072 239 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 WBP2NLQ6ICG8 309 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 PTCRAQ6ISU1 281 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-203ENST00000395060 OR1M1Q8NGA1 313 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 OR8B4Q96RC9 309 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 SPSB2Q99619 263 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 NUDT9Q9BW91 350 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 PRTFDC1Q9NRG1 225 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 ZFP57Q9NU63 452 aa12.84□□□□□ -0.35
CLIP2-203ENST00000395060 MRPL22Q9NWU5 206 aaKnown RBP12.84□□□□□ -0.35
CLIP2-203ENST00000395060 LOC107986453A0A1B0GWG9 222 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 GPR89AB7ZAQ6 455 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 SDCBPO00560 298 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 SCDO00767 359 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 OPN1LWP04000 364 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 SFTPBP07988 381 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 GPR89BP0CG08 455 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 TPT1P13693 172 aaKnown RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 HLA-DOBP13765 273 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 CXCR1P25024 350 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 KRBOX4Q5JUW0 171 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 CDCP2Q5VXM1 449 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 ADGRE4PQ86SQ3 457 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 CLCC1Q96S66 551 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 G6PC3Q9BUM1 346 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 CNTD2Q9H8S5 307 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 FN3KRPQ9HA64 309 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 ACKR4Q9NPB9 350 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 RPH3AQ9Y2J0 694 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 EPOPA6NHQ4 379 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 LRP3O75074 770 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 MED6O75586 246 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 SLC2A1P11166 492 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 RIDAP52758 137 aaKnown RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 PEA15Q15121 130 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 EEF1A1P5Q5VTE0 462 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 ZNF776Q68DI1 518 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 ZNF101Q8IZC7 436 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 LRRC75AQ8NAA5 344 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 OR52N4Q8NGI2 321 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 BAHD1Q8TBE0 780 aaPredicted RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 NXF5Q9H1B4 397 aaKnown RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 MTIF3Q9H2K0 278 aaKnown RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 BANF2Q9H503 90 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 METTL8Q9H825 291 aaKnown RBP12.83□□□□□ -0.36
CLIP2-203ENST00000395060 RHOFQ9HBH0 211 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 PCNX3Q9H6A9 2034 aa12.83□□□□□ -0.36
CLIP2-203ENST00000395060 A0A1W2PP11 408 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 224.8 ms