RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 GPR137Q96N19 417 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 PROK2Q9HC23 129 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 TAS2R4Q9NYW5 299 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 RPS10-NUDT3A0A1W2PQS6 291 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 ANKRD20A5PA0PJZ0 165 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 TOR1AO14656 332 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 GLSO94925 669 aaPredicted RBP12.42□□□□□ -0.42
SNCA-204ENST00000394989 PGA4P0DJD7 388 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 PGA3P0DJD8 388 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 POU3F4P49335 361 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 TSPAN5P62079 268 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 CAMK2DQ13557 499 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 GPAT4Q86UL3 456 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 OR51A2Q8NGJ7 313 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 OR6M1Q8NGM8 313 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 OR1J4Q8NGS1 313 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 SLC25A28Q96A46 364 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 C20orf85Q9H1P6 137 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 CYB5R1Q9UHQ9 305 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 OR52A1Q9UKL2 312 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 SLC17A2O00624 439 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 XRCC3O43542 346 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 CTAG2O75638 210 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 ISG15P05161 165 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 TPOP07202 933 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 DCTDP32321 178 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 DUSP3P51452 185 aaPredicted RBP12.42□□□□□ -0.42
SNCA-204ENST00000394989 C2orf76Q3KRA6 126 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 ANKRD16Q6P6B7 361 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 STPG2Q8N412 459 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 ADPRHL1Q8NDY3 354 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 GIMAP1Q8WWP7 306 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 THRSPQ92748 146 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 PPA2Q9H2U2 334 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 RANBP3Q9H6Z4 567 aaPredicted RBP12.42□□□□□ -0.42
SNCA-204ENST00000394989 TMEM269A0A1B0GVZ9 245 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 LOC107986453A0A1B0GWG9 222 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 EIF1AYO14602 144 aaKnown RBP12.41□□□□□ -0.42
SNCA-204ENST00000394989 ALDOBP05062 364 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 H2AFB2P0C5Z0 115 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 CCL3P10147 92 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 TCEAL6Q6IPX3 200 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 UEVLDQ8IX04 471 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 BOLLQ8N9W6 283 aaKnown RBP12.41□□□□□ -0.42
SNCA-204ENST00000394989 OR4K17Q8NGC6 315 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 OR2Y1Q8NGV0 311 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 TCEAL3Q969E4 200 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 FAM3DQ96BQ1 224 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 WDR89Q96FK6 387 aaPredicted RBP12.41□□□□□ -0.42
SNCA-204ENST00000394989 TTLL8A6PVC2 850 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 LDOC1O95751 146 aaPredicted RBP12.41□□□□□ -0.42
SNCA-204ENST00000394989 ECDO95905 644 aaPredicted RBP12.41□□□□□ -0.42
SNCA-204ENST00000394989 APOC3P02656 99 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 FSTP19883 344 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 TMEM176BQ3YBM2 270 aaPredicted RBP12.41□□□□□ -0.42
SNCA-204ENST00000394989 SFRP5Q5T4F7 317 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 SLC25A44Q96H78 314 aaPredicted RBP12.41□□□□□ -0.42
SNCA-204ENST00000394989 CENPMQ9NSP4 180 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 FAM206AQ9NX38 181 aa12.41□□□□□ -0.42
SNCA-204ENST00000394989 ARPC4-TTLL3A0A0A6YYG9 625 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 ACOT7O00154 380 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 TP53I11O14683 189 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 CD37P11049 281 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 NUP62P37198 522 aaPredicted RBP12.4□□□□□ -0.42
SNCA-204ENST00000394989 EIF1AXP47813 144 aaKnown RBP12.4□□□□□ -0.42
SNCA-204ENST00000394989 SELENOPP49908 381 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 RAG2P55895 527 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 MRPS10P82664 201 aaKnown RBP12.4□□□□□ -0.42
SNCA-204ENST00000394989 DEGS2Q6QHC5 323 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 OR56B4Q8NH76 319 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 NTNG2Q96CW9 530 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 SORCS2Q96PQ0 1159 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 AKAP7Q9P0M2 348 aaPredicted RBP12.4□□□□□ -0.42
SNCA-204ENST00000394989 HHLA2Q9UM44 414 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 MAB21L2Q9Y586 359 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 MRPS18BQ9Y676 258 aaKnown RBP12.4□□□□□ -0.42
SNCA-204ENST00000394989 GGT3PA6NGU5 568 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 HPXP02790 462 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 ADH6P28332 368 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 CDAP32320 146 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 EXT1Q16394 746 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 THEM4Q5T1C6 240 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 NOXO1Q8NFA2 376 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 OR13C3Q8NGS6 347 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 SLAMF6Q96DU3 332 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 GNRHR2Q96P88 292 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 OR2M2Q96R28 347 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 GSX2Q9BZM3 304 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 PTGES2Q9H7Z7 377 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 ZNF275Q9NSD4 429 aaPredicted RBP12.4□□□□□ -0.42
SNCA-204ENST00000394989 LHFPL6Q9Y693 200 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 TMEM272A0A1B0GTI8 110 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 C9J4A7 227 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 RRASP10301 218 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 LAP3P28838 519 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 MMP16P51512 607 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 RAB11BQ15907 218 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 M1APQ8TC57 530 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms