RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 OR51A7Q8NH64 312 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 TSLPQ969D9 159 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC25A21Q9BQT8 299 aaPredicted RBP11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 DOCK4Q8N1I0 1966 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 LAMA3Q16787 3333 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 CASP8AP2Q9UKL3 1982 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 OR4C45A6NMZ5 311 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 LCATP04180 440 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 FGF5P12034 268 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 FUT3P21217 361 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 PBX2P40425 430 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC6A9P48067 706 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 SGSHP51688 502 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 CLDN2P57739 230 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 TAS2R19P59542 299 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 ADAM8P78325 824 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 P2RY6Q15077 328 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC9A3R2Q15599 337 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 DNM1P46Q6ZS02 220 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 KMT5CQ86Y97 462 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF514Q96K75 400 aaPredicted RBP11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 TP53RKQ96S44 253 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC17A5Q9NRA2 495 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC13A4Q9UKG4 626 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 PLXNA3P51805 1871 aa11.29□□□□□ -0.6
SLC28A1-203ENST00000394573 TRAV27A0A087WT01 109 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 A0A1B0GVT2 93 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 FITM1A5D6W6 292 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF736B4DX44 427 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 H3BRB1 525 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 GGCTO75223 188 aaKnown RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ASGR1P07306 291 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 OR4Q2P0C623 313 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF735P0CB33 412 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 CALCBP10092 127 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 CEACAM1P13688 526 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 AKT2P31751 481 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 GABRA4P48169 554 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 RNF219Q5W0B1 726 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 RPUSD3Q6P087 351 aaKnown RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 C12orf76Q8N812 135 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 PFN4Q8NHR9 129 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ASB11Q8WXH4 323 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ALKBH7Q9BT30 221 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 C20orf141Q9NUB4 165 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 P2RX2Q9UBL9 471 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 RNF150Q9ULK6 438 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 KCNE3Q9Y6H6 103 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 V9GYS6 101 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 TSPAN11A1L157 253 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF705FA8MVS1 300 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 K7EPK0 472 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 SYT7O43581 403 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 KLF8O95600 359 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 CYB5AP00167 134 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF705DP0CH99 300 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF705BP0CI00 300 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 PI3P19957 117 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 PDE7AQ13946 482 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 CEBPEQ15744 281 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 FAM78AQ5JUQ0 283 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF880Q6PDB4 577 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 SMIM15Q7Z3B0 74 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 FAM71E2Q8N5Q1 922 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF740Q8NDX6 193 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 OR52L1Q8NGH7 329 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 DIO2Q92813 273 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 COL26A1Q96A83 441 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ALPK2Q86TB3 2170 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 DOCK8Q8NF50 2099 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 TRBV11-1A0A0K0K1C0 115 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 NKX6-3A6NJ46 265 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 XKRYO14609 159 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 HPRT1P00492 218 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 TK1P04183 234 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 JMJD7P0C870 316 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 TAS2R38P59533 333 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 TDRG1Q3Y452 100 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 TMEM108Q6UXF1 575 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 RFLNAQ6ZTI6 216 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 ZNF679Q8IYX0 411 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 HS6ST3Q8IZP7 471 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 GJD3Q8N144 294 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 OR52N4Q8NGI2 321 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 RNASEH2CQ8TDP1 164 aaKnown RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 Q96M85 177 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 SLC7A7Q9UM01 511 aa11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 MRPS2Q9Y399 296 aaKnown RBP11.28□□□□□ -0.6
SLC28A1-203ENST00000394573 EP400Q96L91 3159 aa11.27□□□□□ -0.61
SLC28A1-203ENST00000394573 LNP1A1A4G5 178 aa11.27□□□□□ -0.61
SLC28A1-203ENST00000394573 ABLIM3O94929 683 aa11.27□□□□□ -0.61
SLC28A1-203ENST00000394573 GCGP01275 180 aa11.27□□□□□ -0.61
SLC28A1-203ENST00000394573 SLC35G6P0C7Q6 338 aa11.27□□□□□ -0.61
SLC28A1-203ENST00000394573 LMO1P25800 156 aa11.27□□□□□ -0.61
SLC28A1-203ENST00000394573 PRPS1P60891 318 aa11.27□□□□□ -0.61
SLC28A1-203ENST00000394573 COL10A1Q03692 680 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms