RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 OR5B3Q8NH48 314 aa2.62□□□□□ -1.99
SNORA40.4-201ENST00000390971 LRRC29Q8WV35 223 aa2.62□□□□□ -1.99
SNORA40.4-201ENST00000390971 DUS3LQ96G46 650 aaKnown RBP2.62□□□□□ -1.99
SNORA40.4-201ENST00000390971 OR5B12Q96R08 314 aa2.62□□□□□ -1.99
SNORA40.4-201ENST00000390971 NT5C3AQ9H0P0 336 aa2.62□□□□□ -1.99
SNORA40.4-201ENST00000390971 LGALS13Q9UHV8 139 aa2.62□□□□□ -1.99
SNORA40.4-201ENST00000390971 TMEM120BA0PK00 339 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 BTNL10A8MVZ5 291 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 C16orf90A8MZG2 172 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 IGLV3-25P01717 112 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 CRYGBP07316 175 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 GGT1P19440 569 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 GDI2P50395 445 aaKnown RBP2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 CDH6P55285 790 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 PRMT2P55345 433 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 SRSF5Q13243 272 aaKnown RBP2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 UBE2UQ5VVX9 321 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 TMEM107Q6UX40 140 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 CASP12Q6UXS9 341 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 NPWQ8N729 165 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 RSPH1Q8WYR4 309 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 TMEM230Q96A57 120 aa2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 GCOM2Q9BZD3 368 aaPredicted RBP2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 DHCR7Q9UBM7 475 aaKnown RBP2.61□□□□□ -1.99
SNORA40.4-201ENST00000390971 LYRM9A8MSI8 78 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 AIM2O14862 343 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 EIF4E2O60573 245 aaKnown RBP2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 EIF1BO60739 113 aaKnown RBP2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 ATF6P18850 670 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 EIF1P41567 113 aaKnown RBP2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 ZNF726P1Q15940 193 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 SSX2Q16385 188 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 GPR107Q5VW38 600 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 SASS6Q6UVJ0 657 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 CHST4Q8NCG5 386 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 C1orf64Q8NEQ6 169 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 OR9K2Q8NGE7 335 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 SLC29A1Q99808 456 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 GGTLC1Q9BX51 225 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 C21orf62Q9NYP8 219 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 ZNF391Q9UJN7 358 aa2.6□□□□□ -1.99
SNORA40.4-201ENST00000390971 FKBP6O75344 327 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 TSPAN13O95857 204 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 CYB5R3P00387 301 aaPredicted RBP2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 IGHV3-11P01762 117 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 ACSM4P0C7M7 580 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 ZNF24P17028 368 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 PSMB5P28074 263 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 TNNT2P45379 298 aaPredicted RBP2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 STXBP1P61764 594 aaKnown RBP2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 RPS11P62280 158 aaKnown RBP eCLIP2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 TGM3Q08188 693 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 PPP1R7Q15435 360 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 YIF1BQ5BJH7 314 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 RNASEKQ6P5S7 137 aaKnown RBP2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 OR11H7Q8NGC8 314 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 IP6K3Q96PC2 410 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 RACGAP1Q9H0H5 632 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 EXTL2Q9UBQ6 330 aa2.59□□□□□ -1.99
SNORA40.4-201ENST00000390971 SHROOM3Q8TF72 1996 aa2.59□□□□□ -2
SNORA40.4-201ENST00000390971 KRBOX1C9JBD0 128 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 CPLX1O14810 134 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 CHMP2AO43633 222 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 PAHP00439 452 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 U2AF2P26368 475 aaKnown RBP eCLIP2.58□□□□□ -2
SNORA40.4-201ENST00000390971 LOXP28300 417 aaPredicted RBP2.58□□□□□ -2
SNORA40.4-201ENST00000390971 PRLHRP49683 370 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 CCNG1P51959 295 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 GFERP55789 205 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 RPL23P62829 140 aaKnown RBP2.58□□□□□ -2
SNORA40.4-201ENST00000390971 PRR3P79522 188 aaKnown RBP2.58□□□□□ -2
SNORA40.4-201ENST00000390971 TEX30Q5JUR7 227 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 NPSR1Q6W5P4 371 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 NKAIN4Q8IVV8 208 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 SLC35G3Q8N808 338 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 KLF14Q8TD94 323 aaPredicted RBP2.58□□□□□ -2
SNORA40.4-201ENST00000390971 OR51M1Q9H341 326 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 HRASLS2Q9NWW9 162 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 RHBDL2Q9NX52 303 aa2.58□□□□□ -2
SNORA40.4-201ENST00000390971 IGHV3-72A0A0B4J1Y9 119 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 GLSO94925 669 aaPredicted RBP2.57□□□□□ -2
SNORA40.4-201ENST00000390971 SERPINA3P01011 423 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 RBM34P42696 430 aaKnown RBP2.57□□□□□ -2
SNORA40.4-201ENST00000390971 ACLYP53396 1101 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 RBX1P62877 108 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 BAMBIQ13145 260 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 TBC1D21Q8IYX1 336 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 CSGALNACT2Q8N6G5 542 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 ZNF680Q8NEM1 530 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 OR5M1Q8NGP8 315 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 KIFAP3Q92845 792 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 EEF1AKMT3Q96AZ1 226 aa2.57□□□□□ -2
SNORA40.4-201ENST00000390971 CDX2Q99626 313 aaPredicted RBP2.57□□□□□ -2
SNORA40.4-201ENST00000390971 ZNF230Q9UIE0 474 aaPredicted RBP2.57□□□□□ -2
SNORA40.4-201ENST00000390971 ANKRD12Q6UB98 2062 aa2.56□□□□□ -2
SNORA40.4-201ENST00000390971 SEC16AO15027 2179 aa2.56□□□□□ -2
SNORA40.4-201ENST00000390971 OR5H1A6NKK0 313 aa2.56□□□□□ -2
SNORA40.4-201ENST00000390971 SMKR1H3BMG3 65 aa2.56□□□□□ -2
SNORA40.4-201ENST00000390971 H7C417 338 aa2.56□□□□□ -2
SNORA40.4-201ENST00000390971 NVLO15381 856 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms