RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ILF3Q12906 894 aaKnown RBP eCLIP5.26□□□□□ -1.57
TRAV35-201ENST00000390462 ECH1Q13011 328 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 UNC119Q13432 240 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 KIAA0141Q14154 515 aaPredicted RBP5.26□□□□□ -1.57
TRAV35-201ENST00000390462 PSG5Q15238 335 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 TEAD2Q15562 447 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 ZNHIT3Q15649 155 aaPredicted RBP5.26□□□□□ -1.57
TRAV35-201ENST00000390462 PIGGQ5H8A4 983 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 ACTL10Q5JWF8 245 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 RBM48Q5RL73 367 aaKnown RBP5.26□□□□□ -1.57
TRAV35-201ENST00000390462 MUC21Q5SSG8 566 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 LHFPL3Q86UP9 236 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 ZNF491Q8N8L2 437 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 TMEM178AQ8NBL3 297 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 CCDC112Q8NEF3 446 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 DUSP18Q8NEJ0 188 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 OR10G7Q8NGN6 311 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 OR51A7Q8NH64 312 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 OR5AK3PQ8NH89 298 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 ERMNQ8TAM6 284 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 ADAMTS16Q8TE57 1224 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 RNF133Q8WVZ7 376 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 FGF11Q92914 225 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 MCHR1Q99705 422 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 NICN1Q9BSH3 213 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 ING2Q9H160 280 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 SIAEQ9HAT2 523 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 NLE1Q9NVX2 485 aaPredicted RBP5.26□□□□□ -1.57
TRAV35-201ENST00000390462 PLEKHJ1Q9NW61 149 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 RHBDL2Q9NX52 303 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 GNPTGQ9UJJ9 305 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 PLLPQ9Y342 182 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 GOLT1BQ9Y3E0 138 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 CPQQ9Y646 472 aa5.26□□□□□ -1.57
TRAV35-201ENST00000390462 COL4A1P02462 1669 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 BCLAF3A2AJT9 711 aaKnown RBP5.25□□□□□ -1.57
TRAV35-201ENST00000390462 C15orf61A6NNL5 157 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 C16orf97H3BN30 126 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 K7EQD1 137 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 ZNF749O43361 778 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 HLA-DRAP01903 254 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 PVRP15151 417 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 ZNF250P15622 560 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 GPM6AP51674 278 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 DLX5P56178 289 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 AP3S2P59780 193 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 GLO1Q04760 184 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 KIAA1644Q3SXP7 199 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 SLC36A2Q495M3 483 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 COX19Q49B96 90 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 TTMPQ5BVD1 217 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 VAX1Q5SQQ9 334 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 NFE4Q86UQ8 179 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 LSMEM2Q8N112 164 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 DEFB123Q8N688 67 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 KLHDC9Q8NEP7 349 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 OR2L5Q8NG80 312 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 OR5M1Q8NGP8 315 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 RNASEH2CQ8TDP1 164 aaKnown RBP5.25□□□□□ -1.57
TRAV35-201ENST00000390462 TFB1MQ8WVM0 346 aaKnown RBP5.25□□□□□ -1.57
TRAV35-201ENST00000390462 IFT81Q8WYA0 676 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 DDB2Q92466 427 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 PAGE5Q96GU1 130 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 TM2D1Q9BX74 207 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 UPF3AQ9H1J1 476 aaKnown RBP5.25□□□□□ -1.57
TRAV35-201ENST00000390462 PORCNQ9H237 461 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 CAB39LQ9H9S4 337 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 ISYNA1Q9NPH2 558 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 FKBP14Q9NWM8 211 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 ZNF446Q9NWS9 450 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 SDHAF2Q9NX18 166 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 SLC25A37Q9NYZ2 338 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 MUTYHQ9UIF7 546 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 FBXL3Q9UKT7 428 aa5.25□□□□□ -1.57
TRAV35-201ENST00000390462 LAMA2P24043 3122 aaKnown RBP5.24□□□□□ -1.57
TRAV35-201ENST00000390462 A0A1B0GU03 582 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 TRABD2BA6NFA1 517 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 E9PLD3 99 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 NPIPB8E9PQR5 432 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 INSIG1O15503 277 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 MBTPS2O43462 519 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 NXPH4O95158 308 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 PRSS1P07477 247 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 SNRPCP09234 159 aaKnown RBP5.24□□□□□ -1.57
TRAV35-201ENST00000390462 CD3GP09693 182 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 HCAR3P49019 387 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 RPL31P62899 125 aaKnown RBP5.24□□□□□ -1.57
TRAV35-201ENST00000390462 ABRAXAS2Q15018 415 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 TIMM23BQ5SRD1 257 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 CEP85LQ5SZL2 805 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 TRPT1Q86TN4 253 aaKnown RBP5.24□□□□□ -1.57
TRAV35-201ENST00000390462 PRR22Q8IZ63 422 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 PGAM4Q8N0Y7 254 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 PUSL1Q8N0Z8 303 aaKnown RBP5.24□□□□□ -1.57
TRAV35-201ENST00000390462 LRRC52Q8N7C0 313 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 ZNF557Q8N988 423 aaPredicted RBP5.24□□□□□ -1.57
TRAV35-201ENST00000390462 WDR31Q8NA23 367 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 OR52B6Q8NGF0 335 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 OR5D18Q8NGL1 313 aa5.24□□□□□ -1.57
TRAV35-201ENST00000390462 OR13A1Q8NGR1 328 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms