RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CREB3L2Q70SY1 520 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 NAXDQ8IW45 347 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 OR51D1Q8NGF3 324 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 TMEM54Q969K7 222 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 SLC25A28Q96A46 364 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 CDC6Q99741 560 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 PBOV1Q9GZY1 135 aa20.51■□□□□ 0.87
VPS16-201ENST00000380443 FAM172BPA6NC97 362 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 GGT3PA6NGU5 568 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 PRAF2O60831 178 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 ERP29P30040 261 aaKnown RBP20.5■□□□□ 0.87
VPS16-201ENST00000380443 NKX2-5P52952 324 aaPredicted RBP20.5■□□□□ 0.87
VPS16-201ENST00000380443 CLDN17P56750 224 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 MRPS15P82914 257 aaKnown RBP20.5■□□□□ 0.87
VPS16-201ENST00000380443 CD83Q01151 205 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 RSPO4Q2I0M5 234 aaPredicted RBP20.5■□□□□ 0.87
VPS16-201ENST00000380443 NCCRP1Q6ZVX7 275 aaPredicted RBP20.5■□□□□ 0.87
VPS16-201ENST00000380443 JSRP1Q96MG2 331 aaPredicted RBP20.5■□□□□ 0.87
VPS16-201ENST00000380443 GHITMQ9H3K2 345 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 CCDC187A0A096LP49 1063 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 A0A0A6YYJ9 748 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 C21orf140B9A014 251 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 NPIPA2E9PIF3 369 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 NPIPA3F8WFD2 350 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 RAD1O60671 282 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 ACSM4P0C7M7 580 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 HSD11B1P28845 292 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 FAUP35544 74 aaKnown RBP20.5■□□□□ 0.87
VPS16-201ENST00000380443 CSNK1A1P48729 337 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 ACER2Q5QJU3 275 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 CD276Q5ZPR3 534 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 FOXL2NBQ6ZUU3 175 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 OR10S1Q8NGN2 331 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 MED28Q9H204 178 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 RCE1Q9Y256 329 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 DMXL1Q9Y485 3027 aa20.5■□□□□ 0.87
VPS16-201ENST00000380443 A8MV72 311 aaPredicted RBP20.49■□□□□ 0.87
VPS16-201ENST00000380443 SULT1C2O00338 296 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 RGS13O14921 159 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 ATP6V1G1O75348 118 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 RBBP9O75884 186 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 TTRP02766 147 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 SUCLG1P53597 346 aaKnown RBP20.49■□□□□ 0.87
VPS16-201ENST00000380443 GRB2P62993 217 aaKnown RBP20.49■□□□□ 0.87
VPS16-201ENST00000380443 Q0VFX4 171 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 TAF13Q15543 124 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 CARD17Q5XLA6 110 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 DMRTB1Q96MA1 342 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 FYTTD1Q96QD9 318 aaKnown RBP20.49■□□□□ 0.87
VPS16-201ENST00000380443 P4HTMQ9NXG6 502 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 CACNA1CQ13936 2221 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 KIF26BQ2KJY2 2108 aa20.49■□□□□ 0.87
VPS16-201ENST00000380443 TRAV6A0A075B6T7 132 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 H3BSH0 61 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 H7C417 338 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 P2RY10O00398 339 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 EIF1AYO14602 144 aaKnown RBP20.48■□□□□ 0.87
VPS16-201ENST00000380443 RAMP1O60894 148 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 C1QBP02746 253 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 MT-ND4P03905 459 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 GABRA1P14867 456 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 PSMB1P20618 241 aaKnown RBP20.48■□□□□ 0.87
VPS16-201ENST00000380443 CTSSP25774 331 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 STOMP27105 288 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 RAC3P60763 192 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 RPS18P62269 152 aaKnown RBP20.48■□□□□ 0.87
VPS16-201ENST00000380443 ZNF468Q5VIY5 522 aaPredicted RBP20.48■□□□□ 0.87
VPS16-201ENST00000380443 LUZP2Q86TE4 346 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 RNF170Q96K19 258 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 SORCS2Q96PQ0 1159 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 EMC7Q9NPA0 242 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 MCUBQ9NWR8 336 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 STMN3Q9NZ72 180 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 MTFP1Q9UDX5 166 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 A0A1B0GVI7 797 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 SYT7O43581 403 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 CSF1P09603 554 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 CFAP77Q6ZQR2 320 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 PLPP7Q8NBV4 271 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 OR9K2Q8NGE7 335 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 OR6N1Q8NGY5 312 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 CAPSLQ8WWF8 208 aa20.48■□□□□ 0.87
VPS16-201ENST00000380443 EML6Q6ZMW3 1958 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 TMEM272A0A1B0GTI8 110 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 CIB4A0PJX0 185 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 C9orf172C9J069 976 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 ERCC1P07992 297 aaPredicted RBP20.47■□□□□ 0.87
VPS16-201ENST00000380443 RAB6AP20340 208 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 BDKRB2P30411 391 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 CYB561P49447 251 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 B3GALT5-AS1P59052 145 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 MFAP5Q13361 173 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 GLYATL3Q5SZD4 288 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 FGD2Q7Z6J4 655 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 ADGRE4PQ86SQ3 457 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 LYPD6Q86Y78 171 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 CDH26Q8IXH8 852 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 BEST3Q8N1M1 668 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 OR5D14Q8NGL3 314 aa20.47■□□□□ 0.87
VPS16-201ENST00000380443 UQCC2Q9BRT2 126 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms