RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 NDUFB8O95169 186 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 EPHX1P07099 455 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 ELLP55199 621 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 TRA2BP62995 288 aaKnown RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 GPNMBQ14956 572 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 RAB41Q5JT25 222 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 CTSL3PQ5NE16 218 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 FAM180AQ6UWF9 173 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 FCRLAQ7L513 359 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 GRASPQ7Z6J2 395 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 LINC01551Q86U37 167 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 WFDC8Q8IUA0 241 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 KDM8Q8N371 416 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 TXN2Q99757 166 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 SLC35B3Q9H1N7 401 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 CST9LQ9H4G1 147 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 USP36Q9P275 1121 aaKnown RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 CORO2BQ9UQ03 480 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 ZNF281Q9Y2X9 895 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 MRPS18BQ9Y676 258 aaKnown RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 GOLGA4Q13439 2230 aaKnown RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 K7EPK0 472 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 PLPP2O43688 288 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 GPRIN2O60269 458 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 CSF1P09603 554 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 GTF2F2P13984 249 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 LIM2P55344 173 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 RGS8P57771 180 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 DLK1P80370 383 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 TSTA3Q13630 321 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 SYPL1Q16563 259 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 C1orf189Q5VU69 101 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 FAM71E2Q8N5Q1 922 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 COMMD1Q8N668 190 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 TMEM18Q96B42 140 aa8.46□□□□□ -1.06
PTPRA-204ENST00000380393 PNO1Q9NRX1 252 aaKnown RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 AURKAIP1Q9NWT8 199 aaPredicted RBP8.46□□□□□ -1.06
PTPRA-204ENST00000380393 VCANP13611 3396 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 GRM6O15303 877 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 ERAL1O75616 437 aaKnown RBP8.45□□□□□ -1.06
PTPRA-204ENST00000380393 SCGB1D2O95969 90 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 CH25HO95992 272 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 H1F0P07305 194 aaKnown RBP8.45□□□□□ -1.06
PTPRA-204ENST00000380393 NID1P14543 1247 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 MAKP20794 623 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 MDKP21741 143 aaPredicted RBP8.45□□□□□ -1.06
PTPRA-204ENST00000380393 GLRA1P23415 457 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 MC5RP33032 325 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 GABRA4P48169 554 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 TAS2R19P59542 299 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 SLAQ13239 276 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 GPR18Q14330 331 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 ODF1Q14990 250 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 MIDNQ504T8 468 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 FAM151BQ6UXP7 276 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 NPAS4Q8IUM7 802 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 OR4K14Q8NGD5 310 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 OR51G2Q8NGK0 314 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 OR8S1Q8NH09 359 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 ADAMTS18Q8TE60 1221 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 AUTS2Q8WXX7 1259 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 BCL2L2Q92843 193 aaPredicted RBP8.45□□□□□ -1.06
PTPRA-204ENST00000380393 IGSF8Q969P0 613 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 TMEM19Q96HH6 336 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 ZNF48Q96MX3 618 aaPredicted RBP8.45□□□□□ -1.06
PTPRA-204ENST00000380393 LYSMD1Q96S90 227 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 PRRT1Q99946 306 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 LGR4Q9BXB1 951 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 CHST8Q9H2A9 424 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 SRPK3Q9UPE1 567 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 TDRD15B5MCY1 1934 aaKnown RBP8.45□□□□□ -1.06
PTPRA-204ENST00000380393 GON4LQ3T8J9 2241 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 A0A0D9SEW6 157 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 PPIBP23284 216 aaKnown RBP8.45□□□□□ -1.06
PTPRA-204ENST00000380393 FPR2P25090 351 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 SULT1A2P50226 295 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 H3F3AP84243 136 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 RAB11BQ15907 218 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 SMIM21Q3B7S5 101 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 FBLN7Q53RD9 439 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 BHLHA9Q7RTU4 235 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 BIVMQ86UB2 503 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 SYNPRQ8TBG9 265 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 TMEM234Q8WY98 164 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 GINS3Q9BRX5 216 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 UPB1Q9UBR1 384 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 WDR45Q9Y484 360 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 ANK1P16157 1881 aa8.45□□□□□ -1.06
PTPRA-204ENST00000380393 PTGESO14684 152 aa8.44□□□□□ -1.06
PTPRA-204ENST00000380393 NME2P1O60361 137 aa8.44□□□□□ -1.06
PTPRA-204ENST00000380393 SLC25A14O95258 325 aaPredicted RBP8.44□□□□□ -1.06
PTPRA-204ENST00000380393 CEACAM1P13688 526 aa8.44□□□□□ -1.06
PTPRA-204ENST00000380393 EN2P19622 333 aaPredicted RBP8.44□□□□□ -1.06
PTPRA-204ENST00000380393 ARR3P36575 388 aa8.44□□□□□ -1.06
PTPRA-204ENST00000380393 SNCAP37840 140 aa8.44□□□□□ -1.06
PTPRA-204ENST00000380393 DHRS2Q13268 280 aa8.44□□□□□ -1.06
PTPRA-204ENST00000380393 PCBP2Q15366 365 aaKnown RBP eCLIP8.44□□□□□ -1.062e-6■■■□□ 19.1
PTPRA-204ENST00000380393 TAF9Q16594 264 aa8.44□□□□□ -1.06
PTPRA-204ENST00000380393 CLEC12AQ5QGZ9 265 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms