RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 IGSF11Q5DX21 431 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 TRIM61Q5EBN2 209 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 GLYATL3Q5SZD4 288 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 C6orf183Q5T699 404 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 CARD17Q5XLA6 110 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 CD276Q5ZPR3 534 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 C3orf33Q6P1S2 294 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 DNM1P34Q6PK57 102 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 OR4D10Q8NGI6 311 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 OR13C3Q8NGS6 347 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 SLA2Q9H6Q3 261 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 EMC7Q9NPA0 242 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 SDHAF3Q9NRP4 125 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 KLHL13Q9P2N7 655 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 HSPB11Q9Y547 144 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 PCDHGA5Q9Y5G8 931 aa7.09□□□□□ -1.28
PDLIM5-204ENST00000380176 TRAV18A0A075B6X5 111 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 LOC102723996A0A087X1L8 192 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 A0A1W2PPL8 197 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 G3V3Y1 287 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 ARPC1BO15143 372 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 ZNF780AO75290 641 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 AQP8O94778 261 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 COX6A1P12074 109 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 CFPP27918 469 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 MNDAP41218 407 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 RAD52P43351 418 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 RAG2P55895 527 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 ZFP36L1Q07352 338 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 STK11Q15831 433 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 RAB11BQ15907 218 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 TMEM176BQ3YBM2 270 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 OR10K2Q6IF99 312 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 C9orf62Q8N4C0 152 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 FADS6Q8N9I5 356 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 RNF133Q8WVZ7 376 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 IMMP1LQ96LU5 166 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 WDR54Q9H977 334 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 AKAP7Q9P0M2 348 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 CYB5R1Q9UHQ9 305 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 GPN3Q9UHW5 284 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 ELF5Q9UKW6 265 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 HS3ST3B1Q9Y662 390 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 NCKAP5O14513 1909 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 TRAF3IP2O43734 574 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 TSPAN9O75954 239 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 LDOC1O95751 146 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 CD2P06729 351 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 H2BFMP0C1H6 154 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 PGA4P0DJD7 388 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 PGA3P0DJD8 388 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 CCL3P10147 92 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 ANXA7P20073 488 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 GRNP28799 593 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 SELENOPP49908 381 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 MMP16P51512 607 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 PCGF3Q3KNV8 242 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 OLFML2AQ68BL7 652 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 CFAP77Q6ZQR2 320 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 PLCZ1Q86YW0 608 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 UEVLDQ8IX04 471 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 DEFB123Q8N688 67 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 AGBL5Q8NDL9 886 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 OR4K17Q8NGC6 315 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 LILRB4Q8NHJ6 448 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 GRPEL2Q8TAA5 225 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 SLAMF6Q96DU3 332 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 GNRHR2Q96P88 292 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 SEC22CQ9BRL7 303 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 ATG5Q9H1Y0 275 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 SEC61A2Q9H9S3 476 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 NOX3Q9HBY0 568 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 FAM206AQ9NX38 181 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 HHLA2Q9UM44 414 aa7.08□□□□□ -1.28
PDLIM5-204ENST00000380176 COL27A1Q8IZC6 1860 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 LOC100289279A0A1B0GTE1 492 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 H7C417 338 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 SSNA1O43805 119 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 TTRP02766 147 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 HRGP04196 525 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 ISG15P05161 165 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 KLK3P07288 261 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 SULT1A3P0DMM9 295 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 SULT1A4P0DMN0 295 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 HTR2CP28335 458 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 SCAND1P57086 179 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 CLRN1P58418 232 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 AP3S2P59780 193 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 MRPS10P82664 201 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 REC114Q7Z4M0 266 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 SGK3Q96BR1 496 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 HYLS1Q96M11 299 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 RBP7Q96R05 134 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 ACTR6Q9GZN1 396 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 PROK2Q9HC23 129 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 EMC3Q9P0I2 261 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 MTFP1Q9UDX5 166 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 MGAT4AQ9UM21 535 aa7.07□□□□□ -1.28
PDLIM5-204ENST00000380176 LHFPL6Q9Y693 200 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms