RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SFTPCP11686 197 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 CPN1P15169 458 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 C11orf87Q6NUJ2 197 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 FAM199XQ6PEV8 388 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-202ENST00000379826 MRGPREQ86SM8 312 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 ANGPTL5Q86XS5 388 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 ANKRD9Q96BM1 317 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-202ENST00000379826 SLC25A38Q96DW6 304 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 C10orf90Q96M02 699 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 PIGMQ9H3S5 423 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 C12orf10Q9HB07 376 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 MRPS28Q9Y2Q9 187 aaKnown RBP10.28□□□□□ -0.76
SMAD9-202ENST00000379826 MFSD2BA6NFX1 497 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 ATXN7O15265 892 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-202ENST00000379826 OR2F2O95006 317 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 MPZL1O95297 269 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 GABRA1P14867 456 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 AKR1C3P42330 323 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 PSG6Q00889 435 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 OR2F1Q13607 317 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 AVPI1Q5T686 147 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 CBLN3Q6UW01 205 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 GLIPR1L1Q6UWM5 242 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 FAM160A2Q8N612 972 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-202ENST00000379826 MARCH1Q8TCQ1 289 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 RSPO3Q9BXY4 272 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-202ENST00000379826 OPN4Q9UHM6 478 aa10.28□□□□□ -0.76
SMAD9-202ENST00000379826 A6NIZ1 184 aa10.27□□□□□ -0.76
SMAD9-202ENST00000379826 BIDP55957 195 aa10.27□□□□□ -0.76
SMAD9-202ENST00000379826 RAP1BP61224 184 aa10.27□□□□□ -0.76
SMAD9-202ENST00000379826 RAP1AP62834 184 aa10.27□□□□□ -0.76
SMAD9-202ENST00000379826 ETFDHQ16134 617 aa10.27□□□□□ -0.76
SMAD9-202ENST00000379826 TMEM196Q5HYL7 178 aa10.27□□□□□ -0.76
SMAD9-202ENST00000379826 C1orf140Q5VVS0 124 aa10.27□□□□□ -0.76
SMAD9-202ENST00000379826 FGF14Q92915 247 aa10.27□□□□□ -0.76
SMAD9-202ENST00000379826 ZNF578Q96N58 590 aaPredicted RBP10.27□□□□□ -0.76
SMAD9-202ENST00000379826 A0A087WV48 116 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 CCDC163A0A0D9SF12 145 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 PRSS37A4D1T9 235 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 ALOX12BO75342 701 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 WNT11O96014 354 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 CBX5P45973 191 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 PLA2G7Q13093 441 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 GALNT16Q8N428 558 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 LRRC18Q8N456 261 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 GVQW1Q8N7I0 195 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 HOXB13Q92826 284 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-202ENST00000379826 TCTN2Q96GX1 697 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 MMP25Q9NPA2 562 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 SLC22A23A1A5C7 686 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 CD63P08962 238 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 CD1CP29017 333 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 EXOSC6Q5RKV6 272 aaKnown RBP10.27□□□□□ -0.77
SMAD9-202ENST00000379826 ANKRD16Q6P6B7 361 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 ZNRF4Q8WWF5 429 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 RPP25Q9BUL9 199 aaKnown RBP10.27□□□□□ -0.77
SMAD9-202ENST00000379826 RAB22AQ9UL26 194 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 LRP12Q9Y561 859 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 PIN1P1O15428 100 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 CNR1P21554 472 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF93P35789 620 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-202ENST00000379826 RAB2AP61019 212 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 FLI1Q01543 452 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-202ENST00000379826 PEA15Q15121 130 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 PRTGQ2VWP7 1150 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 MESTQ5EB52 335 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 RAB11FIP2Q7L804 512 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 LYG2Q86SG7 212 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 C12orf57Q99622 126 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 PLEKHJ1Q9NW61 149 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF629Q9UEG4 869 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-202ENST00000379826 TET1Q8NFU7 2136 aa10.27□□□□□ -0.77
SMAD9-202ENST00000379826 TNFSF15O95150 251 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 GABREP78334 506 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 PDZK1IP1Q13113 114 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 DHRS2Q13268 280 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 OTOSQ8NHW6 89 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 OR51E1Q8TCB6 317 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 HGDQ93099 445 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 ADAT1Q9BUB4 502 aaKnown RBP10.26□□□□□ -0.77
SMAD9-202ENST00000379826 B9D1Q9UPM9 204 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 BORCS7-ASMTA0A0B4J1R7 106 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 TMEM225BP0DP42 221 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 LRRTM1Q86UE6 522 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 MYO7AQ13402 2215 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 GPR31O00270 319 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 SDCBPO00560 298 aaPredicted RBP10.26□□□□□ -0.77
SMAD9-202ENST00000379826 ATG12O94817 140 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 SERPINA5P05154 406 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 CCNOP22674 350 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 ACAA2P42765 397 aaKnown RBP10.26□□□□□ -0.77
SMAD9-202ENST00000379826 PPP1R1AQ13522 171 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 TMEM229BQ8NBD8 167 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 SLAMF9Q96A28 289 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 NXF5Q9H1B4 397 aaKnown RBP10.26□□□□□ -0.77
SMAD9-202ENST00000379826 MED29Q9NX70 200 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 FNDC1Q4ZHG4 1894 aaPredicted RBP10.26□□□□□ -0.77
SMAD9-202ENST00000379826 ARID1BQ8NFD5 2236 aaPredicted RBP10.26□□□□□ -0.77
SMAD9-202ENST00000379826 KLF4O43474 513 aa10.26□□□□□ -0.77
SMAD9-202ENST00000379826 C1orf53Q5VUE5 145 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms