RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 HCFC1P51610 2035 aa11□□□□□ -0.65
VRK3-202ENST00000377011 MED12LQ86YW9 2145 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 A0A0G2JNJ9 132 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 CBR3O75828 277 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 SLC22A5O76082 557 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 TXNDC12O95881 172 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 TACSTD2P09758 323 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 H2AFB2P0C5Z0 115 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 CALCBP10092 127 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 PRF1P14222 555 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 SNRPBP14678 240 aaKnown RBP10.99□□□□□ -0.65
VRK3-202ENST00000377011 RPL4P36578 427 aaKnown RBP10.99□□□□□ -0.65
VRK3-202ENST00000377011 CASP6P55212 293 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 ZNF684Q5T5D7 378 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 WBP2NLQ6ICG8 309 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 ELMOD2Q8IZ81 293 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 ZNF808Q8N4W9 903 aaPredicted RBP10.99□□□□□ -0.65
VRK3-202ENST00000377011 ZNF671Q8TAW3 534 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 RAB40AQ8WXH6 277 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 THRSPQ92748 146 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 PHF21AQ96BD5 680 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 C3orf49Q96BT1 292 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 TAS2R10Q9NYW0 307 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 B4GALT7Q9UBV7 327 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 Q9UFV3 132 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 GNG8Q9UK08 70 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 HIF3AQ9Y2N7 669 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 ETV7Q9Y603 341 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 PDZD2O15018 2839 aa10.99□□□□□ -0.65
VRK3-202ENST00000377011 MEIKINA0A087WXM9 373 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 OR14I1A6ND48 311 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 PRSS44E7EML9 344 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 GABARAPH6UMI1 98 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 ZNF432O94892 652 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 RAF1P04049 648 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SULT1A3P0DMM9 295 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SULT1A4P0DMN0 295 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SRMP19623 302 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 DPP4P27487 766 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 LCN1P31025 176 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SNRPD2P62316 118 aaKnown RBP10.98□□□□□ -0.65
VRK3-202ENST00000377011 DGCR2P98153 550 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SRYQ05066 204 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SNTB2Q13425 540 aaKnown RBP10.98□□□□□ -0.65
VRK3-202ENST00000377011 GSG1Q2KHT4 349 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 KLHL26Q53HC5 615 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 FAM209AQ5JX71 171 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 CBLN3Q6UW01 205 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 TEX261Q6UWH6 196 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SLC16A9Q7RTY1 509 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 RFLNBQ8N5W9 214 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 OR8H1Q8NGG4 311 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 OR13C5Q8NGS8 318 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 OR14L1PQ8NHC6 308 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 LGALS14Q8TCE9 139 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 OR14A2Q96R54 314 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 PPP4R1LQ9P1A2 415 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 MGAT4AQ9UM21 535 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 NPTNQ9Y639 398 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 U3KQ87 197 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 IFITM5A6NNB3 132 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 FAM90A27PA6NNH2 459 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 LEUTXA8MZ59 168 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 TGM6O95932 706 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 OPN1LWP04000 364 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 CD3GP09693 182 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 IL11P20809 199 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 C4BPBP20851 252 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 GIFP27352 417 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SRD5A2P31213 254 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 NAA10P41227 235 aaPredicted RBP10.98□□□□□ -0.65
VRK3-202ENST00000377011 LHX2P50458 406 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 CCR9P51686 369 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SUCLG1P53597 346 aaKnown RBP10.98□□□□□ -0.65
VRK3-202ENST00000377011 SNTB1Q13884 538 aaKnown RBP10.98□□□□□ -0.65
VRK3-202ENST00000377011 ACSF3Q4G176 576 aaPredicted RBP10.98□□□□□ -0.65
VRK3-202ENST00000377011 C1orf185Q5T7R7 199 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 LINC01590Q5TEZ4 76 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SP5Q6BEB4 398 aaPredicted RBP10.98□□□□□ -0.65
VRK3-202ENST00000377011 POMZP3Q6PJE2 187 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 FAM220AQ7Z4H9 259 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 OR11H7Q8NGC8 314 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 NSMAFQ92636 917 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SARAFQ96BY9 339 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SORCS2Q96PQ0 1159 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 CITED4Q96RK1 184 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 DHRS9Q9BPW9 319 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 PRDM14Q9GZV8 571 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SLITRK2Q9H156 845 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 NANSQ9NR45 359 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SLCO1C1Q9NYB5 712 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 SLC23A1Q9UHI7 598 aa10.98□□□□□ -0.65
VRK3-202ENST00000377011 TRAV6A0A075B6T7 132 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 OR6C68A6NDL8 312 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 TUBAL3A6NHL2 446 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 ALG1L2C9J202 215 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 PEX14O75381 377 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 IFNA7P01567 189 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 CD14P08571 375 aa10.97□□□□□ -0.65
VRK3-202ENST00000377011 CFPP27918 469 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms