RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 AKAIN1P0CW23 69 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 BDKRB2P30411 391 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 CCL11P51671 97 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 CCR9P51686 369 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 RAP1BP61224 184 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 RAP1AP62834 184 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 RIN1Q13671 783 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 MFSD13AQ14CX5 517 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 SPINK14Q6IE38 97 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 OTOSQ8NHW6 89 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 RADILQ96JH8 1075 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 SDHCQ99643 169 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-203ENST00000376619 URM1Q9BTM9 101 aaKnown RBP9.99□□□□□ -0.81
HDAC6-203ENST00000376619 RANBP3Q9H6Z4 567 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-203ENST00000376619 STEAP1Q9UHE8 339 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 MRPS28Q9Y2Q9 187 aaKnown RBP9.99□□□□□ -0.81
HDAC6-203ENST00000376619 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.99□□□□□ -0.813e-8■■■□□ 16.1
HDAC6-203ENST00000376619 MSX1P28360 303 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 ARG2P78540 354 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 FZD5Q13467 585 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 ZNF141Q15928 474 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 BCL2A1Q16548 175 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 BAIAP2L2Q6UXY1 529 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 ANKRD37Q7Z713 158 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 RELL2Q8NC24 303 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-203ENST00000376619 BORCS8Q96FH0 119 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 WNT16Q9UBV4 365 aa9.99□□□□□ -0.81
HDAC6-203ENST00000376619 TECTAO75443 2155 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 USF3Q68DE3 2245 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 A0A1W2PQM1 296 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 hCG_1807616A0A1W2PRN6 198 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 CENPBD1B2RD01 187 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 EIF4E2O60573 245 aaKnown RBP9.98□□□□□ -0.81
HDAC6-203ENST00000376619 DDAH2O95865 285 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 MFAP5Q13361 173 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 CDK10Q15131 360 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ZNF687Q8N1G0 1237 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 SGCZQ96LD1 299 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 EHFQ9NZC4 300 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 LSM5Q9Y4Y9 91 aaKnown RBP9.98□□□□□ -0.81
HDAC6-203ENST00000376619 PLXNA3P51805 1871 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 TMEM82A0PJX8 343 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 GGT3PA6NGU5 568 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 TPD52L2O43399 206 aaKnown RBP9.98□□□□□ -0.81
HDAC6-203ENST00000376619 KCNAB3O43448 404 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 CNOT4O95628 575 aaKnown RBP9.98□□□□□ -0.81
HDAC6-203ENST00000376619 EPHA8P29322 1005 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-203ENST00000376619 LTC4SQ16873 150 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 FHL5Q5TD97 284 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 METTL11BQ5VVY1 283 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 DMKNQ6E0U4 476 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ZNF813Q6ZN06 617 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 TMPRSS7Q7RTY8 843 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 LRRTM1Q86UE6 522 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 LIX1LQ8IVB5 337 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 OR4C16Q8NGL9 310 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 FLVCR1-AS1Q8TAF5 88 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ST6GAL2Q96JF0 529 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 TMEM59Q9BXS4 323 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 TREM1Q9NP99 234 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 TAS2R3Q9NYW6 316 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 EXOGQ9Y2C4 368 aaKnown RBP9.98□□□□□ -0.81
HDAC6-203ENST00000376619 SLC22A23A1A5C7 686 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ALG1L2C9J202 215 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 BET1O15155 118 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 FBXO24O75426 580 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 STK17BO94768 372 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 WISP1O95388 367 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 SYNGR4O95473 234 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 PNPP00491 289 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ANKRD34CP0C6C1 535 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ALOX5APP20292 161 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 CX3CR1P49238 355 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ACTBP60709 375 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ACTG1P63261 375 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 PLA2G7Q13093 441 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 SMCO1Q147U7 214 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ST3GAL2Q16842 350 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 FAM74A1Q5RGS3 127 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 OR5AS1Q8N127 324 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 OR5H2Q8NGV7 314 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 OR52N5Q8NH56 324 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 LILRB4Q8NHJ6 448 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 ZNF721Q8TF20 911 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 NAA11Q9BSU3 229 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-203ENST00000376619 LRFN1Q9P244 771 aa9.98□□□□□ -0.81
HDAC6-203ENST00000376619 IGHV5-10-1A0A0J9YXX1 117 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 A0A1B0GW55 424 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 A0A1W2PP11 408 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 OR5H15A6NDH6 313 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 MRPL33O75394 65 aaKnown RBP9.97□□□□□ -0.81
HDAC6-203ENST00000376619 HOXC4P09017 264 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-203ENST00000376619 DUX4L2P0CJ85 424 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 DUX4L3P0CJ86 424 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 DUX4L4P0CJ87 422 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 DUX4L5P0CJ88 424 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 DUX4L6P0CJ89 424 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 DUX4L7P0CJ90 424 aa9.97□□□□□ -0.81
HDAC6-203ENST00000376619 ZNF121P58317 390 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-203ENST00000376619 SPATA46Q5T0L3 261 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms