RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 CXCR6O00574 342 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 KHDRBS3O75525 346 aaKnown RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 SASH3O75995 380 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 GPANK1O95872 356 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 CYB5R3P00387 301 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 RNASE1P07998 156 aaKnown RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 FXYD6P3P58550 94 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 SLC9A3R2Q15599 337 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 FBXW12Q6X9E4 464 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 PTCHD4Q6ZW05 846 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 GLB1L2Q8IW92 636 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 MUC20Q8N307 709 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 OR8G5Q8NG78 346 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 SLC7A13Q8TCU3 470 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 FAM46AQ96IP4 442 aaKnown RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 SSBP3Q9BWW4 388 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 MS4A7Q9GZW8 240 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 RERGLQ9H628 205 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 UNKLQ9H9P5 680 aaKnown RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 ZMAT3Q9HA38 289 aaKnown RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 NRIP3Q9NQ35 241 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 VSX1Q9NZR4 365 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-204ENST00000376491 OR5V1Q9UGF6 321 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 IL20RAQ9UHF4 553 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 LRCH1Q9Y2L9 728 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 CAPN7Q9Y6W3 813 aa12.51□□□□□ -0.41
CLCN6-204ENST00000376491 IGHV3-64DA0A0J9YX35 117 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 J3QW42 95 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 NME4O00746 187 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 SOCS2O14508 198 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 MLNRO43193 412 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 NDUFB2O95178 105 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 PLATP00750 562 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 SERPINA1P01009 418 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 SDHAP31040 664 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 PMELP40967 661 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 CDKN2AP42771 156 aaKnown RBP12.5□□□□□ -0.41
CLCN6-204ENST00000376491 KCNMB1Q16558 191 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 RSPO1Q2MKA7 263 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-204ENST00000376491 FAM201AQ5SY85 155 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 LEG1Q6P5S2 330 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 FKBP9P1Q75LS8 142 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 RRM2BQ7LG56 351 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 ARPINQ7Z6K5 226 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 KLBQ86Z14 1044 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 PARP8Q8N3A8 854 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 OR52E2Q8NGJ4 325 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 GPX7Q96SL4 187 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-204ENST00000376491 NUAK2Q9H093 628 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 ANKRD19PQ9H560 264 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 ATPIF1Q9UII2 106 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 IER3IP1Q9Y5U9 82 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 ENPP4Q9Y6X5 453 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 MEGF8Q7Z7M0 2845 aa12.5□□□□□ -0.41
CLCN6-204ENST00000376491 IGHV2-70DA0A0C4DH43 119 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 CLDN34H7C241 214 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 DCTN6O00399 190 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 PPIAL4GP0DN37 164 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 RPS2P15880 293 aaKnown RBP12.49□□□□□ -0.41
CLCN6-204ENST00000376491 H2AFXP16104 143 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-204ENST00000376491 SELEP16581 610 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 OMPP47874 163 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 RGS6P49758 472 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 SLC7A2P52569 658 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 HIST1H3AP68431 136 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 DBPQ10586 325 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-204ENST00000376491 MEP1BQ16820 701 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 HIST2H3PS2Q5TEC6 136 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 GPR139Q6DWJ6 353 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 SLC27A4Q6P1M0 643 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 C8orf82Q6P1X6 216 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-204ENST00000376491 C9orf139Q6ZV77 190 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 HIST2H3AQ71DI3 136 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 OR13G1Q8NGZ3 307 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 RAB40AQ8WXH6 277 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 APOBEC3DQ96AK3 386 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-204ENST00000376491 UPRTQ96BW1 309 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 TSSK2Q96PF2 358 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 SLC30A2Q9BRI3 323 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 TMEM246Q9BRR3 403 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 TMEM5Q9Y2B1 443 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 AP3M1Q9Y2T2 418 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 LHFPL6Q9Y693 200 aa12.49□□□□□ -0.41
CLCN6-204ENST00000376491 TRAV40A0A0B4J280 105 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 MDFIC2A0A1B0GVS7 189 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 IQCF6A8MYZ5 107 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 F5H5P2 479 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 IFNL4K9M1U5 179 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 GSTA4O15217 222 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 TXNDC12O95881 172 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 H1F0P07305 194 aaKnown RBP12.48□□□□□ -0.41
CLCN6-204ENST00000376491 NCK1P16333 377 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 CPT2P23786 658 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 SRP9P49458 86 aaKnown RBP12.48□□□□□ -0.41
CLCN6-204ENST00000376491 GSK3BP49841 420 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 PRSS12P56730 875 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 GNB2P62879 340 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 ZNF181Q2M3W8 571 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 ZNF404Q494X3 552 aa12.48□□□□□ -0.41
CLCN6-204ENST00000376491 CORO6Q6QEF8 472 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms