RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 TMEM8BA6NDV4 472 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 KDM4BO94953 1096 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 RAB3DO95716 219 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 PMS2P2O95744 297 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 FBXO45P0C2W1 286 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 MMP16P51512 607 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 GMFBP60983 142 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 SQSTM1Q13501 440 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 ZMYND11Q15326 602 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 TOR2AQ5JU69 321 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 GLYATL3Q5SZD4 288 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 PHF19Q5T6S3 580 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 GUSBP11Q6P575 273 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 C3P1Q6ZMU1 363 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 DCXRQ7Z4W1 244 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 PLPP7Q8NBV4 271 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 APCDD1LQ8NCL9 501 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 DEFB124Q8NES8 71 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 OR51S1Q8NGJ8 323 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 RNF133Q8WVZ7 376 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 DNAJA3Q96EY1 480 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 MRGPRX4Q96LA9 322 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 NUDT22Q9BRQ3 303 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 EXO5Q9H790 373 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 SERINC1Q9NRX5 453 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 SLC22A11Q9NSA0 550 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 KLHL13Q9P2N7 655 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 ARID1BQ8NFD5 2236 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-203ENST00000374490 MAP1BP46821 2468 aaKnown RBP12.45□□□□□ -0.42
HMGCL-203ENST00000374490 CPAMD8Q8IZJ3 1885 aa12.45□□□□□ -0.42
HMGCL-203ENST00000374490 TMEM269A0A1B0GVZ9 245 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 METTL21EPA6NDL7 271 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 LIPT2A6NK58 231 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 MCRIP1C9JLW8 97 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 DOK2O60496 412 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 WISP1O95388 367 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 ONECUT2O95948 504 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 ITGB2P05107 769 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 M6PRP20645 277 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 HSD11B1P28845 292 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 ZNF41P51814 821 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 FBXW4P57775 412 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 GUCA2AQ02747 115 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 FOXF1Q12946 379 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 MEF2DQ14814 521 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 POU4F3Q15319 338 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 B3GNTL1Q67FW5 361 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 SLC23A3Q6PIS1 610 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 ZNF627Q7L945 461 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 KDF1Q8NAX2 398 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 TNFAIP8L1Q8WVP5 186 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 SEH1LQ96EE3 360 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 MOB1AQ9H8S9 216 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 PPP4R1LQ9P1A2 415 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 OPN4Q9UHM6 478 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 RAB22AQ9UL26 194 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 CHD8Q9HCK8 2581 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 CNOT1A5YKK6 2376 aaKnown RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 UNC13CQ8NB66 2214 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 H3BSH0 61 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 H3BUI4 141 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 RAD1O60671 282 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 CYB5AP00167 134 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 PDGFAP04085 211 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 CD74P04233 296 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 CD3DP04234 171 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 HLA-DOBP13765 273 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 CXCL2P19875 107 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 SPINK2P20155 84 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 SEC61A1P61619 476 aaKnown RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 POU3F1Q03052 451 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 PMPCAQ10713 525 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 NKAIN1Q4KMZ8 207 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 OR5M10Q6IEU7 315 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 PAPD4Q6PIY7 484 aaKnown RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 LRFN4Q6PJG9 635 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 BIVMQ86UB2 503 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 NAXDQ8IW45 347 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 NUDT16L1Q9BRJ7 211 aaKnown RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 SCNM1Q9BWG6 230 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 MED11Q9P086 117 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 C19orf25Q9UFG5 118 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 NUP50Q9UKX7 468 aa12.44□□□□□ -0.42
HMGCL-203ENST00000374490 RPH3AQ9Y2J0 694 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-203ENST00000374490 RP1P56715 2156 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 IGHV3-20A0A0C4DH32 117 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 TRBV11-1A0A0K0K1C0 115 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 A0A1W2PPL8 197 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 DISC1C4P0D8 188 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 RP2O75695 350 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 B3GALNT1O75752 331 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 MPZL1O95297 269 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 ERCC1P07992 297 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-203ENST00000374490 RRASP10301 218 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 PPP3CBP16298 524 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 IL11P20809 199 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 MPZP25189 248 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 BDKRB2P30411 391 aa12.43□□□□□ -0.42
HMGCL-203ENST00000374490 EMP2P54851 167 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms