RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 GABREP78334 506 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 IRF7Q92985 503 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 STARD4Q96DR4 205 aa14.01□□□□□ -0.17
COL5A1-201ENST00000371817 NPIPB15A6NHN6 443 aaPredicted RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 LEFTY2O00292 366 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 ARPC3O15145 178 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 SPNP16150 400 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 OR5D13Q8NGL4 314 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 LHFPL5Q8TAF8 219 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 SUSD2Q9UGT4 822 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 DEGS1O15121 323 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 GYPAP02724 150 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 DRAM2Q6UX65 266 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 OR14A16Q8NHC5 309 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 PRSS3P2Q8NHM4 247 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 DLL4Q9NR61 685 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 FTSJ1Q9UET6 329 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 GPR34Q9UPC5 381 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 EPXP11678 715 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 DMWDQ09019 674 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 NPY5RQ15761 445 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 MLF2Q15773 248 aaPredicted RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 TUSC1Q2TAM9 212 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 FDX2Q6P4F2 183 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 OSTM1Q86WC4 334 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 RNF175Q8N4F7 328 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 OR5K2Q8NHB8 316 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 PRSS56P0CW18 603 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 KCNJ10P78508 379 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 ZNF789Q5FWF6 425 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 EIF4E3Q8N5X7 224 aaKnown RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 PSENENQ9NZ42 101 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 BCL9LQ86UU0 1499 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 HBQ1P09105 142 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 OR5G3P0C626 314 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 PTHLHP12272 177 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 FAM110CQ1W6H9 321 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 RANBP10Q6VN20 620 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 HGDQ93099 445 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 ZNF835Q9Y2P0 537 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 ZNF256Q9Y2P7 627 aaPredicted RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 PRAMEF25A6NGN4 478 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 SEMA7AO75326 666 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 OR2J2O76002 312 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 MFAP5Q13361 173 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 SOWAHCQ53LP3 525 aaPredicted RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 PRAMEF5Q5TYX0 476 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 PRAMEF6Q5VXH4 476 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 OR5M10Q6IEU7 315 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 BCDIN3DQ7Z5W3 292 aaKnown RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 CGGBP1Q9UFW8 167 aaPredicted RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 HSPB8Q9UJY1 196 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 SOD1P00441 154 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 CD68P34810 354 aaPredicted RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 GNG4P50150 75 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 FAM26DQ5JW98 314 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 FAAP20Q6NZ36 180 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 PPP1R3CQ9UQK1 317 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 XRN1Q8IZH2 1706 aaKnown RBP14□□□□□ -0.17
COL5A1-201ENST00000371817 IFT172Q9UG01 1749 aa14□□□□□ -0.17
COL5A1-201ENST00000371817 PIAS2O75928 621 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 RPS15P62841 145 aaKnown RBP13.99□□□□□ -0.17
COL5A1-201ENST00000371817 TMEM184AQ6ZMB5 413 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 IGSF8Q969P0 613 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 A4GALTQ9NPC4 353 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 UBE2L5PA0A1B0GUS4 154 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 TIMM8AO60220 97 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-201ENST00000371817 GPR12P47775 334 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 IHHQ14623 411 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 ZNF583Q96ND8 569 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 MRPL13Q9BYD1 178 aaKnown RBP13.99□□□□□ -0.17
COL5A1-201ENST00000371817 RAB29O14966 203 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 SELENOFO60613 162 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 PNRC1Q12796 327 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-201ENST00000371817 BPIFA4PQ86YQ2 179 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 SLC38A9Q8NBW4 561 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 OR52B4Q8NGK2 314 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 OR4C16Q8NGL9 310 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 SIAH2O43255 324 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 MBTPS2O43462 519 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 HIST1H1TP22492 207 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-201ENST00000371817 RTL8BQ17RB0 113 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 KNDC1Q76NI1 1749 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 SLC46A1Q96NT5 459 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 USP22Q9UPT9 525 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 HHEXQ03014 270 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 TMEM191AQ9H0A3 160 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 BANF2Q9H503 90 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 TMEM38AQ9H6F2 299 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 DOK2O60496 412 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 ERHP84090 104 aaKnown RBP13.99□□□□□ -0.17
COL5A1-201ENST00000371817 HLA-BQ31612 363 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 DTD2Q96FN9 168 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 NDRG4Q9ULP0 352 aaKnown RBP13.99□□□□□ -0.17
COL5A1-201ENST00000371817 SGK494L7N484 410 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 TEAD1P28347 426 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 ZNF468Q5VIY5 522 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-201ENST00000371817 LBX2Q6XYB7 198 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 WDTC1Q8N5D0 677 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms