RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 HRO43593 1189 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 TBPP20226 339 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 MRGPRX1Q96LB2 322 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 PLA2G12AQ9BZM1 189 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 MRPL22Q9NWU5 206 aaKnown RBP20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 NDUFB11Q9NX14 153 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 ST8SIA3O43173 380 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 FUCA1P04066 466 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 PPICP45877 212 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 SELENBP1Q13228 472 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 SPANXN5Q5MJ07 72 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 FAM74A1Q5RGS3 127 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 MORN4Q8NDC4 146 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 OLIG1Q8TAK6 271 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 PROCRQ9UNN8 238 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 DDX60Q8IY21 1712 aaKnown RBP20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 SSSCA1O60232 199 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 VAMP5O95183 116 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 GPR12P47775 334 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 WFDC8Q8IUA0 241 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 SKA3Q8IX90 412 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 UBAC2Q8NBM4 344 aa20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 UBE2ZQ9H832 354 aaPredicted RBP20.15■□□□□ 0.82
TM9SF3-201ENST00000371142 LGALS8O00214 317 aa20.14■□□□□ 0.82
TM9SF3-201ENST00000371142 NRASP01111 189 aa20.14■□□□□ 0.82
TM9SF3-201ENST00000371142 UBE2MP61081 183 aaKnown RBP20.14■□□□□ 0.82
TM9SF3-201ENST00000371142 UBE2G1P62253 170 aa20.14■□□□□ 0.82
TM9SF3-201ENST00000371142 DBPQ10586 325 aaPredicted RBP20.14■□□□□ 0.82
TM9SF3-201ENST00000371142 TDHQ8IZJ6 230 aa20.14■□□□□ 0.82
TM9SF3-201ENST00000371142 SLC38A9Q8NBW4 561 aa20.14■□□□□ 0.82
TM9SF3-201ENST00000371142 AK3Q9UIJ7 227 aa20.14■□□□□ 0.82
TM9SF3-201ENST00000371142 TRILQ7L0X0 811 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 GABRG1Q8N1C3 465 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 GABARAPL3Q9BY60 117 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 ZAR1LA6NP61 321 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 ZNF724A8MTY0 619 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 WDR1O75083 606 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 OPRM1P35372 400 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 ARR3P36575 388 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 DDOSTP39656 456 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 MEIKINA0A087WXM9 373 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 DSCR3O14972 297 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 CXCL13O43927 109 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 OR8U1Q8NH10 309 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 MOB1AQ9H8S9 216 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 KLF13Q9Y2Y9 288 aaPredicted RBP20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 LOXL2Q9Y4K0 774 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 MN1Q10571 1320 aaPredicted RBP20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 H2AFB1P0C5Y9 115 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 MYF5P13349 255 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 PTBP1P26599 531 aaKnown RBP eCLIP20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 BSGP35613 385 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 BTG1P62324 171 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 LYSMD1Q96S90 227 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 GABARAPL1Q9H0R8 117 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 POLDIP2Q9Y2S7 368 aa20.14■□□□□ 0.81
TM9SF3-201ENST00000371142 H0YIG0 161 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 IL2RAP01589 272 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 DIO1P49895 249 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 CPEB3Q8NE35 698 aaKnown RBP20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 TEX51A0A1B0GUA7 166 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 GFERP55789 205 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 ZNF85Q03923 595 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 C14orf79Q96F83 325 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 BTF3L4Q96K17 158 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 TMEM43Q9BTV4 400 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 LALBAP00709 142 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 CAPZBP47756 277 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 ZNF416Q9BWM5 594 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 TNFRSF12AQ9NP84 129 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 UPK1AO00322 258 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 PDGFAP04085 211 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 CTSLP07711 333 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 DEFB109BQ30KR1 87 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 CCDC74BQ96LY2 380 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 SLC22A13Q9Y226 551 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 PLRG1O43660 514 aaKnown RBP20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 ETHE1O95571 254 aa20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 ING1Q9UK53 422 aaPredicted RBP20.13■□□□□ 0.81
TM9SF3-201ENST00000371142 CTXN2P0C2S0 81 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 PI3P19957 117 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 CLDN15P56746 228 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 GNB2P62879 340 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 ANKRD33Q7Z3H0 272 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 EDEM2Q9BV94 578 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 SIAEQ9HAT2 523 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 SPACA1Q9HBV2 294 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 PRSS37A4D1T9 235 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 RAF1P04049 648 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 SOX18P35713 384 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 HAGHQ16775 308 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 TVP23CQ96ET8 276 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 OXGR1Q96P68 337 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 MT-ND4LP03901 98 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 PHYHD1Q5SRE7 291 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 FYTTD1Q96QD9 318 aaKnown RBP20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 NMES1Q9C002 83 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 PBOV1Q9GZY1 135 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 S1PR5Q9H228 398 aa20.12■□□□□ 0.81
TM9SF3-201ENST00000371142 TMEM30AQ9NV96 361 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms