RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 HSD17B7P56937 341 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 ZNF683Q8IZ20 524 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 SLC38A6Q8IZM9 456 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 LINC00615Q96LM1 132 aaPredicted RBP14.47□□□□□ -0.09
COL17A1-202ENST00000369733 EMC6Q9BV81 110 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 NSG2Q9Y328 171 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 PPP5D1E7EU14 171 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 PLA2G10O15496 165 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 PRAMEF20Q5VT98 475 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 C9orf135Q5VTT2 229 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 ZFP62Q8NB50 900 aaPredicted RBP14.47□□□□□ -0.09
COL17A1-202ENST00000369733 PPP1R35Q8TAP8 253 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 TNFRSF4P43489 277 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 ZNF79Q15937 498 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 GJC3Q8NFK1 279 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 OR1E3Q8WZA6 343 aa14.47□□□□□ -0.09
COL17A1-202ENST00000369733 ZNF845Q96IR2 970 aaPredicted RBP14.47□□□□□ -0.09
COL17A1-202ENST00000369733 PRSS37A4D1T9 235 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 CPN1P15169 458 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 ADRA2CP18825 462 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 GDF1P27539 372 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 FOLR3P41439 243 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 C19orf57Q0VDD7 668 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 ZNF626Q68DY1 528 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 KIRREL2Q6UWL6 708 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 SKA3Q8IX90 412 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 OR2A1Q8NGT9 310 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 CXorf58Q96LI9 332 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 MCTS1Q9ULC4 181 aaKnown RBP14.46□□□□□ -0.09
COL17A1-202ENST00000369733 MICAL3Q7RTP6 2002 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 TRBV5-3A0A0A0MS03 114 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 SLC17A2O00624 439 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 CYB5BO43169 146 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 ACTL6BO94805 426 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 CBX7O95931 251 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 PCBP3P57721 371 aaKnown RBP14.46□□□□□ -0.09
COL17A1-202ENST00000369733 YBX1P67809 324 aaKnown RBP14.46□□□□□ -0.09
COL17A1-202ENST00000369733 HSF1Q00613 529 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 IRF3Q14653 427 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 OR4S1Q8NGB4 309 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 GNG13Q9P2W3 67 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 KCND3Q9UK17 655 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 FLVCR1Q9Y5Y0 555 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 SCAF4O95104 1147 aaKnown RBP14.46□□□□□ -0.09
COL17A1-202ENST00000369733 HLA-DOBP13765 273 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 IRF2P14316 349 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 ELLP55199 621 aaPredicted RBP14.46□□□□□ -0.09
COL17A1-202ENST00000369733 TMEM123Q8N131 208 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 OR5AP2Q8NGF4 316 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 STT3BQ8TCJ2 826 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 HHIPQ96QV1 700 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 ADAM19Q9H013 955 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 SIGLEC7Q9Y286 467 aa14.46□□□□□ -0.09
COL17A1-202ENST00000369733 ARID1BQ8NFD5 2236 aaPredicted RBP14.46□□□□□ -0.09
COL17A1-202ENST00000369733 SSC5DA1L4H1 1573 aa14.46□□□□□ -0.1
COL17A1-202ENST00000369733 PPM1DO15297 605 aa14.46□□□□□ -0.1
COL17A1-202ENST00000369733 CXCL3P19876 107 aa14.46□□□□□ -0.1
COL17A1-202ENST00000369733 AAED1Q7RTV5 226 aa14.46□□□□□ -0.1
COL17A1-202ENST00000369733 PELI1Q96FA3 418 aa14.46□□□□□ -0.1
COL17A1-202ENST00000369733 S1PR5Q9H228 398 aa14.46□□□□□ -0.1
COL17A1-202ENST00000369733 TMEM184BQ9Y519 407 aaPredicted RBP14.46□□□□□ -0.1
COL17A1-202ENST00000369733 PAPPAQ13219 1627 aa14.46□□□□□ -0.1
COL17A1-202ENST00000369733 IGLV3-16A0A075B6K0 115 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 RAB13P51153 203 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 CA13Q8N1Q1 262 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 SLC38A9Q8NBW4 561 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 BCL7CQ8WUZ0 217 aaPredicted RBP14.45□□□□□ -0.1
COL17A1-202ENST00000369733 GNPNAT1Q96EK6 184 aaPredicted RBP14.45□□□□□ -0.1
COL17A1-202ENST00000369733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.45□□□□□ -0.1
COL17A1-202ENST00000369733 LINC00862A6NCI5 91 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 C10orf111Q8N326 155 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 C17orf47Q8NEP4 570 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 MMP26Q9NRE1 261 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 RUNX2Q13950 521 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 LYPD8Q6UX82 237 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 CPT1CQ8TCG5 803 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 C22orf15Q8WYQ4 148 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 EDAQ92838 391 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 MOB1AQ9H8S9 216 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 BCO1Q9HAY6 547 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 TMPRSS11FQ6ZWK6 438 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 OR52N5Q8NH56 324 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 RLN3Q8WXF3 142 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 MSI2Q96DH6 328 aaKnown RBP14.45□□□□□ -0.1
COL17A1-202ENST00000369733 ARV1Q9H2C2 271 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 ADGRL4Q9HBW9 690 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 C20orf141Q9NUB4 165 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 DNAJB11Q9UBS4 358 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 MTFP1Q9UDX5 166 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 CYB5R1Q9UHQ9 305 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 CDK5RAP2Q96SN8 1893 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 OR6C68A6NDL8 312 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 FABP1P07148 127 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 SNRPEP62304 92 aaKnown RBP14.45□□□□□ -0.1
COL17A1-202ENST00000369733 ABHD17BQ5VST6 288 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 HSD17B13Q7Z5P4 300 aaPredicted RBP14.45□□□□□ -0.1
COL17A1-202ENST00000369733 FBXL6Q8N531 539 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 SEMA6DQ8NFY4 1073 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 LAT2Q9GZY6 243 aa14.45□□□□□ -0.1
COL17A1-202ENST00000369733 RAB9BQ9NP90 201 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms