RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 S100PBPQ96BU1 408 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 COG8Q96MW5 612 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 HDHD5Q9BXW7 423 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 B3GNT2Q9NY97 397 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 ELOVL5Q9NYP7 299 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 OR5H1A6NKK0 313 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 ZG16O60844 167 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 UBL3O95164 117 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 JUNBP17275 347 aaPredicted RBP9.55□□□□□ -0.88
BRCC3-204ENST00000369462 ARR3P36575 388 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 PRKXP51817 358 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 GP2P55259 537 aaKnown RBP9.55□□□□□ -0.88
BRCC3-204ENST00000369462 SLC25A35Q3KQZ1 300 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 ARMCX4Q5H9R4 360 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 SYT6Q5T7P8 510 aaPredicted RBP9.55□□□□□ -0.88
BRCC3-204ENST00000369462 MDP1Q86V88 176 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 CCDC36Q8IYA8 594 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 WDR31Q8NA23 367 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 CPEB3Q8NE35 698 aaKnown RBP9.55□□□□□ -0.88
BRCC3-204ENST00000369462 HSD17B8Q92506 261 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 BOD1Q96IK1 185 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 WACQ9BTA9 647 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 C1QTNF6Q9BXI9 259 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 HDHD2Q9H0R4 259 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 TRIM36Q9NQ86 728 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 SLC17A5Q9NRA2 495 aa9.55□□□□□ -0.88
BRCC3-204ENST00000369462 NKX2-6A6NCS4 301 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 F5H5K5 113 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 C16orf97H3BN30 126 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 SYNGR3O43761 229 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 ZNF254O75437 659 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 DBHP09172 617 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 HOXB1P14653 301 aaPredicted RBP9.54□□□□□ -0.88
BRCC3-204ENST00000369462 HSD11B1P28845 292 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 HTR5AP47898 357 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 GBX2P52951 348 aaPredicted RBP9.54□□□□□ -0.88
BRCC3-204ENST00000369462 RAB35Q15286 201 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 ALKBH2Q6NS38 261 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 TMEM53Q6P2H8 277 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 DPPA2Q7Z7J5 298 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 C17orf78Q8N4C9 275 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 OR1F12Q8NHA8 337 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 ACTR6Q9GZN1 396 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 BRD7Q9NPI1 651 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 DDX28Q9NUL7 540 aaKnown RBP9.54□□□□□ -0.88
BRCC3-204ENST00000369462 PYCARD-AS1I3L0S3 204 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 AGFG2O95081 481 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 CELP19835 753 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 APEX1P27695 318 aaKnown RBP9.54□□□□□ -0.88
BRCC3-204ENST00000369462 CCKARP32238 428 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 UGT2B10P36537 528 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 ALDH3B2P48448 385 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 ASCL1P50553 236 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 PLP2Q04941 152 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 RAB39AQ14964 217 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 RSPO1Q2MKA7 263 aaPredicted RBP9.54□□□□□ -0.88
BRCC3-204ENST00000369462 STEAP2Q8NFT2 490 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 MS4A3Q96HJ5 214 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 OPALINQ96PE5 141 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 GTF2A1LQ9UNN4 478 aa9.54□□□□□ -0.88
BRCC3-204ENST00000369462 SIRT4Q9Y6E7 314 aaPredicted RBP9.54□□□□□ -0.88
BRCC3-204ENST00000369462 SPTAN1Q13813 2472 aaKnown RBP9.53□□□□□ -0.88
BRCC3-204ENST00000369462 TMEM269A0A1B0GVZ9 245 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 OR6C6A6NF89 314 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 PNPP00491 289 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 MLLT11Q13015 90 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-204ENST00000369462 TSTQ16762 297 aaKnown RBP9.53□□□□□ -0.88
BRCC3-204ENST00000369462 TIMM23BQ5SRD1 257 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 LIPKQ5VXJ0 399 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 EGFL6Q8IUX8 553 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 RNF166Q96A37 237 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-204ENST00000369462 KCNJ16Q9NPI9 418 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 N6AMT1Q9Y5N5 214 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 ARPC4-TTLL3A0A0A6YYG9 625 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 SLC2A1P11166 492 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 CCL2P13500 99 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 LIPAP38571 399 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 IDH3GP51553 393 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-204ENST00000369462 NANOS3P60323 173 aaKnown RBP9.53□□□□□ -0.88
BRCC3-204ENST00000369462 GRB2P62993 217 aaKnown RBP9.53□□□□□ -0.88
BRCC3-204ENST00000369462 ECH1Q13011 328 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 C22orf34Q6ZV56 151 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 SATL1Q86VE3 508 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 ZNF584Q8IVC4 421 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 ZNF283Q8N7M2 679 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 MUCL1Q96DR8 90 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 KCNJ15Q99712 375 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 NIPAL2Q9H841 368 aa9.53□□□□□ -0.88
BRCC3-204ENST00000369462 USP9XQ93008 2570 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-204ENST00000369462 IQCMA0A1B0GVH7 501 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 CCNOP22674 350 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 STOMP27105 288 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 SLC6A9P48067 706 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 MFGE8Q08431 387 aaPredicted RBP9.52□□□□□ -0.88
BRCC3-204ENST00000369462 ACSM1Q08AH1 577 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 TAB1Q15750 504 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 NAA40Q86UY6 237 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 SPTSSAQ969W0 71 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 ZNF75AQ96N20 296 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 OBP2BQ9NPH6 170 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms