RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 DNAJC1Q96KC8 554 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 SPIN2AQ99865 258 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 SPIN2BQ9BPZ2 258 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 SCRT1Q9BWW7 348 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ANKRD60Q9BZ19 345 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 TMEM38AQ9H6F2 299 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 NTN4Q9HB63 628 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF355PQ9NSJ1 428 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 LYARQ9NX58 379 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 PDP1Q9P0J1 537 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 TBC1D24Q9ULP9 559 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 ADAMTS13Q76LX8 1427 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 TUBGCP6Q96RT7 1819 aa1.98□□□□□ -2.09
ECHDC1-201ENST00000368287 LYRM9A8MSI8 78 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 NVLO15381 856 aaKnown RBP1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 RAD51CO43502 376 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 FOXH1O75593 365 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 TPM2P07951 284 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 CT45A6P0DMU7 189 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 CT45A5P0DMU8 189 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 CT45A7P0DMV0 189 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 ANXA8P13928 327 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 CCNB1P14635 433 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 TCN2P20062 427 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 GSTM3P21266 225 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 U2AF2P26368 475 aaKnown RBP eCLIP1.97□□□□□ -2.091e-8■■□□□ 14.3
ECHDC1-201ENST00000368287 SSTR5P35346 364 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 MRPL19P49406 292 aaKnown RBP1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 PPP1CBP62140 327 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 SEMG2Q02383 582 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 PSMD5Q16401 504 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 CT45A1Q5HYN5 189 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF684Q5T5D7 378 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 ANXA8L1Q5VT79 327 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 UBE2UQ5VVX9 321 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 GPR26Q8NDV2 337 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 OR8U1Q8NH10 309 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 CT45A3Q8NHU0 189 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 SYNPRQ8TBG9 265 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 PIFOQ8TCI5 191 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 APH1BQ8WW43 257 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 ESR2Q92731 530 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 FRZBQ92765 325 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 SEH1LQ96EE3 360 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 DYNLL2Q96FJ2 89 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 GALNT14Q96FL9 552 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 LINC00477Q96M19 166 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 EXO5Q9H790 373 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 CCNB1IP1Q9NPC3 277 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 SIRT7Q9NRC8 400 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 AHSPQ9NZD4 102 aa1.97□□□□□ -2.09
ECHDC1-201ENST00000368287 A0A0U1RQV1 116 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 C5orf63A6NC05 138 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 WRBO00258 174 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 GABRPO00591 440 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 RAD51BO15315 384 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 CCNB2O95067 398 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 VAMP5O95183 116 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 SLC25A14O95258 325 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 CLTAP09496 248 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF806P0C7X5 589 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 PSMC3P17980 439 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 TUBG1P23258 451 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 BMI1P35226 326 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 SERPINB8P50452 374 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 RAB9AP51151 201 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 RPS15AP62244 130 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ARG2P78540 354 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 DGCR6Q14129 220 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ABCA11PQ4W5N1 156 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ORMDL2Q53FV1 153 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 FAM78AQ5JUQ0 283 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 THEM4Q5T1C6 240 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 FBXW9Q5XUX1 488 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 TWF2Q6IBS0 349 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 NPSR1Q6W5P4 371 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 LGI3Q8N145 548 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF709Q8N972 641 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 TTC29Q8NA56 475 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 BPIFCQ8NFQ6 507 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 OR6N1Q8NGY5 312 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 CIRBP-AS1Q8TBR5 109 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 OR51E1Q8TCB6 317 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF721Q8TF20 911 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 TSEN15Q8WW01 171 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 TMEM230Q96A57 120 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 NTAN1Q96AB6 310 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF488Q96MN9 340 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 RNF145Q96MT1 663 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 XPO6Q96QU8 1125 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 TIMM17AQ99595 171 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 OR52D1Q9H346 318 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ELOVL6Q9H5J4 265 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 LYRM4Q9HD34 91 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 TUBG2Q9NRH3 451 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 C20orf96Q9NUD7 363 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNRD1Q9P1U0 126 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 ZNF835Q9Y2P0 537 aa1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 RCL1Q9Y2P8 373 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-201ENST00000368287 COMMD3-BMI1R4GMX3 469 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms