RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PURGQ9UJV8 347 aaKnown RBP12.58□□□□□ -0.4
COL6A1-201ENST00000361866 KCNS2Q9ULS6 477 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 SLC17A4Q9Y2C5 497 aa12.58□□□□□ -0.4
COL6A1-201ENST00000361866 PRSS37A4D1T9 235 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 IGHG1P01857 330 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 EFNB2P52799 333 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 NANOS3P60323 173 aaKnown RBP12.57□□□□□ -0.4
COL6A1-201ENST00000361866 HNRNPKP61978 463 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL6A1-201ENST00000361866 S100A12P80511 92 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 OGFOD3Q6PK18 319 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 CHRDL2Q6WN34 429 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 GALNT16Q8N428 558 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 TMEM217Q8N7C4 229 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 SCPEP1Q9HB40 452 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 SMCO4Q9NRQ5 59 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 FAM212BQ9NTI7 297 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-201ENST00000361866 WBP1LQ9NX94 342 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 PRR13Q9NZ81 148 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 ASH2LQ9UBL3 628 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 HSPB6O14558 160 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 SHOXO15266 292 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 NKX2-2O95096 273 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 KLK3P07288 261 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-201ENST00000361866 ZIC1Q15915 447 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 SOHLH1Q5JUK2 328 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 DCAF12L2Q5VW00 463 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 SLC43A2Q8N370 569 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 BVESQ8NE79 360 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 TTC9Q92623 222 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 TCTN2Q96GX1 697 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 C4orf45Q96LM5 186 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 MMP25Q9NPA2 562 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 FRRS1LQ9P0K9 344 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 FAM221AA4D161 298 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 TRIM77I1YAP6 450 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 TP53I11O14683 189 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 OGG1O15527 345 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 OPRM1P35372 400 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 FMODQ06828 376 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 DLX2Q07687 328 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-201ENST00000361866 OR52H1Q8NGJ2 320 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 MR1Q95460 341 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 C10orf90Q96M02 699 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 RPP25Q9BUL9 199 aaKnown RBP12.57□□□□□ -0.4
COL6A1-201ENST00000361866 CHRDQ9H2X0 955 aa12.57□□□□□ -0.4
COL6A1-201ENST00000361866 ZNF230Q9UIE0 474 aaPredicted RBP12.57□□□□□ -0.4
COL6A1-201ENST00000361866 WDR81Q562E7 1941 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 TP53BP1Q12888 1972 aaPredicted RBP12.56□□□□□ -0.4
COL6A1-201ENST00000361866 MED19A0JLT2 244 aaPredicted RBP12.56□□□□□ -0.4
COL6A1-201ENST00000361866 TUBAL3A6NHL2 446 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 ARPC3O15145 178 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 BCL2L11O43521 198 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 MPZL1O95297 269 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 NMBP08949 121 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 PRICKLE4Q2TBC4 344 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 ELFN2Q5R3F8 820 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 ANKRD16Q6P6B7 361 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 Q6ZRG5 221 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 SFTPA2Q8IWL1 248 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 LHFPL5Q8TAF8 219 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 PNPLA2Q96AD5 504 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 RSPRY1Q96DX4 576 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 SHDQ96IW2 340 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 ARL5BQ96KC2 179 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 PRSS27Q9BQR3 290 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 LRFN1Q9P244 771 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 C4orf51C9J302 202 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 ITGB2P05107 769 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 ALDH3B1P43353 468 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 CX3CR1P49238 355 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 NR0B2Q15466 257 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 LYG2Q86SG7 212 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 WDSUB1Q8N9V3 476 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 TMEM52Q8NDY8 209 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 PAPPA2Q9BXP8 1791 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 C4orf47A7E2U8 309 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 BET1O15155 118 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 HLA-DQB1P01920 261 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 CSNK1A1P48729 337 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 RPS18P62269 152 aaKnown RBP12.56□□□□□ -0.4
COL6A1-201ENST00000361866 SPRED2Q7Z698 418 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 NKAIN3Q8N8D7 197 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 NPEPL1Q8NDH3 523 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 OR5L2Q8NGL0 311 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 OTOSQ8NHW6 89 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 WNT2BQ93097 391 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 UBL7Q96S82 380 aaPredicted RBP12.56□□□□□ -0.4
COL6A1-201ENST00000361866 WWTR1Q9GZV5 400 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 OR10A2Q9H208 303 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 SPACA1Q9HBV2 294 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 WIF1Q9Y5W5 379 aa12.56□□□□□ -0.4
COL6A1-201ENST00000361866 TRBV11-1A0A0K0K1C0 115 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 C9J4A7 227 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 DCTN6O00399 190 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 GFERP55789 205 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 HSD17B7P56937 341 aa12.55□□□□□ -0.4
COL6A1-201ENST00000361866 NKX6-1P78426 367 aaPredicted RBP12.55□□□□□ -0.4
COL6A1-201ENST00000361866 EGR3Q06889 387 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms