RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 MAP6Q96JE9 813 aa11.78□□□□□ -0.52
NFIX-201ENST00000358552 C4orf45Q96LM5 186 aa11.78□□□□□ -0.52
NFIX-201ENST00000358552 SRXN1Q9BYN0 137 aa11.78□□□□□ -0.52
NFIX-201ENST00000358552 ACTR6Q9GZN1 396 aa11.78□□□□□ -0.52
NFIX-201ENST00000358552 LDAHQ9H6V9 325 aa11.78□□□□□ -0.52
NFIX-201ENST00000358552 SEC61A2Q9H9S3 476 aa11.78□□□□□ -0.52
NFIX-201ENST00000358552 NUFIP1Q9UHK0 495 aaKnown RBP11.78□□□□□ -0.52
NFIX-201ENST00000358552 KLHDC2Q9Y2U9 406 aa11.78□□□□□ -0.52
NFIX-201ENST00000358552 RBMX2Q9Y388 322 aaKnown RBP11.78□□□□□ -0.52
NFIX-201ENST00000358552 PCDHGA9Q9Y5G4 932 aaKnown RBP11.78□□□□□ -0.52
NFIX-201ENST00000358552 A0A1W2PPL8 197 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 ZNF716A6NP11 495 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 ZNF878C9JN71 531 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 UBCP0CG48 685 aaKnown RBP11.77□□□□□ -0.52
NFIX-201ENST00000358552 PSMB10P40306 273 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 NKX2-5P52952 324 aaPredicted RBP11.77□□□□□ -0.52
NFIX-201ENST00000358552 CLDN18P56856 261 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 SCAND1P57086 179 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 RRAS2P62070 204 aaPredicted RBP11.77□□□□□ -0.52
NFIX-201ENST00000358552 RPS11P62280 158 aaKnown RBP eCLIP11.77□□□□□ -0.52
NFIX-201ENST00000358552 MRPS34P82930 218 aaKnown RBP11.77□□□□□ -0.52
NFIX-201ENST00000358552 ZNF767PQ75MW2 155 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 AAED1Q7RTV5 226 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 SYT9Q86SS6 491 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 CCDC54Q8NEL0 328 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 HYLS1Q96M11 299 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 UCN2Q96RP3 112 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 PDCD1LG2Q9BQ51 273 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 TMEM246Q9BRR3 403 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 ULBP2Q9BZM5 246 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 TCF7L1Q9HCS4 588 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 CEP295Q9C0D2 2601 aa11.77□□□□□ -0.52
NFIX-201ENST00000358552 FREM3P0C091 2139 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 ZFHX4Q86UP3 3567 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 RAMP1O60894 148 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 TPPPO94811 219 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 FCGR2AP12318 317 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 CTSSP25774 331 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 GZMKP49863 264 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 NANOS3P60323 173 aaKnown RBP11.77□□□□□ -0.53
NFIX-201ENST00000358552 FAPQ12884 760 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 TNK1Q13470 666 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 ATP1A1-AS1Q5TC04 95 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 FAM27BQ5VT28 67 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 SFXN4Q6P4A7 337 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 LRRN1Q6UXK5 716 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.77□□□□□ -0.53
NFIX-201ENST00000358552 CATSPERDQ86XM0 798 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 GPR137CQ8N3F9 429 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 ZIC4Q8N9L1 334 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 SNIP1Q8TAD8 396 aaKnown RBP11.77□□□□□ -0.53
NFIX-201ENST00000358552 RELTQ969Z4 430 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 SLAMF6Q96DU3 332 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 ZNF385AQ96PM9 386 aaKnown RBP11.77□□□□□ -0.53
NFIX-201ENST00000358552 THAP7Q9BT49 309 aaPredicted RBP11.77□□□□□ -0.53
NFIX-201ENST00000358552 TTTY10Q9BZA0 68 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 PRRG4Q9BZD6 226 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 LINC00470Q9BZP3 86 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 DPAGT1Q9H3H5 408 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 GLRX2Q9NS18 164 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 CKLFQ9UBR5 152 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 LRP12Q9Y561 859 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 ALG5Q9Y673 324 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 KCNMB2Q9Y691 235 aa11.77□□□□□ -0.53
NFIX-201ENST00000358552 TRGV5A0A0B4J1U4 118 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 IGKV1D-43A0A0B4J1Z2 117 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 TMEM269A0A1B0GVZ9 245 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 MEGF11A6BM72 1044 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 TTLL8A6PVC2 850 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 FAM166BA8MTA8 275 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 MAGEB4O15481 346 aaPredicted RBP11.76□□□□□ -0.53
NFIX-201ENST00000358552 UBL3O95164 117 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 FAM157BP0CG42 384 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 ELK1P19419 428 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 SLC6A1P30531 599 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 STARP49675 285 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 CAPZA1P52907 286 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 PCBD1P61457 104 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 ECH1Q13011 328 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 TAF13Q15543 124 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 DEFB109BQ30KR1 87 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 CARD17Q5XLA6 110 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 LSRQ86X29 649 aaPredicted RBP11.76□□□□□ -0.53
NFIX-201ENST00000358552 RNF170Q96K19 258 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 DERL3Q96Q80 235 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 BCO1Q9HAY6 547 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
NFIX-201ENST00000358552 GDF2Q9UK05 429 aaPredicted RBP11.76□□□□□ -0.53
NFIX-201ENST00000358552 HHLA2Q9UM44 414 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 ING4Q9UNL4 249 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 ZNF175Q9Y473 711 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 NUBP2Q9Y5Y2 271 aa11.76□□□□□ -0.53
NFIX-201ENST00000358552 PRR32B1ATL7 298 aa11.75□□□□□ -0.53
NFIX-201ENST00000358552 PSMD9O00233 223 aa11.75□□□□□ -0.53
NFIX-201ENST00000358552 CTDSPLO15194 276 aa11.75□□□□□ -0.53
NFIX-201ENST00000358552 MRPL33O75394 65 aaKnown RBP11.75□□□□□ -0.53
NFIX-201ENST00000358552 MPZL1O95297 269 aa11.75□□□□□ -0.53
NFIX-201ENST00000358552 GPANK1O95872 356 aa11.75□□□□□ -0.53
NFIX-201ENST00000358552 IGHG3P01860 377 aa11.75□□□□□ -0.53
NFIX-201ENST00000358552 ARSBP15848 533 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms