RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CRHBPP24387 322 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 LOXP28300 417 aaPredicted RBP12.88□□□□□ -0.35
CCNE1-202ENST00000357943 OPRL1P41146 370 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ACTC1P68032 377 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ACTA1P68133 377 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 GALK2Q01415 458 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ST3GAL4Q11206 333 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 BLMHQ13867 455 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 TBC1D28Q2M2D7 210 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 ACBD7Q8N6N7 88 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 HS3ST6Q96QI5 342 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 COPS4Q9BT78 406 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 FGF20Q9NP95 211 aaPredicted RBP12.88□□□□□ -0.35
CCNE1-202ENST00000357943 FKBP14Q9NWM8 211 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 PAK1IP1Q9NWT1 392 aaPredicted RBP12.88□□□□□ -0.35
CCNE1-202ENST00000357943 SLCO1C1Q9NYB5 712 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 CNOT2Q9NZN8 540 aaKnown RBP12.88□□□□□ -0.35
CCNE1-202ENST00000357943 PCDHGB1Q9Y5G3 927 aa12.88□□□□□ -0.35
CCNE1-202ENST00000357943 PKDREJQ9NTG1 2253 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 CELSR2Q9HCU4 2923 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 DAPL1A0PJW8 107 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 EFCAB10A6NFE3 127 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 F5H5K5 113 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 PIPP12273 146 aaPredicted RBP12.87□□□□□ -0.35
CCNE1-202ENST00000357943 C21orf33P30042 268 aaPredicted RBP12.87□□□□□ -0.35
CCNE1-202ENST00000357943 GDI2P50395 445 aaKnown RBP12.87□□□□□ -0.35
CCNE1-202ENST00000357943 CSNK2BP67870 215 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 HGFACQ04756 655 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 DAZAP2Q15038 168 aaPredicted RBP12.87□□□□□ -0.35
CCNE1-202ENST00000357943 HIST2H2BCQ6DN03 193 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 ADAM5Q6NVV9 412 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 KCTD18Q6PI47 426 aaPredicted RBP12.87□□□□□ -0.35
CCNE1-202ENST00000357943 RHOUQ7L0Q8 258 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 LHFPL3Q86UP9 236 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 ASB17Q8WXJ9 295 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF649Q9BS31 505 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 YTHDF1Q9BYJ9 559 aaKnown RBP12.87□□□□□ -0.35
CCNE1-202ENST00000357943 SCN3BQ9NY72 215 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 ATPIF1Q9UII2 106 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 SCOCQ9UIL1 159 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 LRP12Q9Y561 859 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 CSMD2Q7Z408 3487 aa12.87□□□□□ -0.35
CCNE1-202ENST00000357943 CADP27708 2225 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 IRGMA1A4Y4 181 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 A6NNC1 897 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 ATP6V1G2-DDX39BF2Z307 99 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 PHYHO14832 338 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 PLAUP00749 431 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 CRYAAP02489 173 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 H2BFMP0C1H6 154 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 DCKP27707 260 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 OTX1P32242 354 aaPredicted RBP12.86□□□□□ -0.35
CCNE1-202ENST00000357943 WNT5AP41221 380 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 PRKXP51817 358 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 NR1H2P55055 460 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 SLC35A2P78381 396 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 ROM1Q03395 351 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 ECH1Q13011 328 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 TAF13Q15543 124 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 KRTAP27-1Q3LI81 207 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 KRT77Q7Z794 578 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 NAA40Q86UY6 237 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF679Q8IYX0 411 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 IL17RDQ8NFM7 739 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 TMEM80Q96HE8 168 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 OR8B4Q96RC9 309 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 MROQ9BYG7 248 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 ERVK13-1Q9NX77 482 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 MRM2Q9UI43 246 aaKnown RBP12.86□□□□□ -0.35
CCNE1-202ENST00000357943 IKZF2Q9UKS7 526 aa12.86□□□□□ -0.35
CCNE1-202ENST00000357943 DIMT1Q9UNQ2 313 aaKnown RBP12.86□□□□□ -0.35
CCNE1-202ENST00000357943 HRNRQ86YZ3 2850 aaPredicted RBP12.85□□□□□ -0.35
CCNE1-202ENST00000357943 M0R135 149 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 ANOS1P23352 680 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 CALRP27797 417 aaKnown RBP12.85□□□□□ -0.35
CCNE1-202ENST00000357943 HSD11B1P28845 292 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 GRB2P62993 217 aaKnown RBP12.85□□□□□ -0.35
CCNE1-202ENST00000357943 EGR3Q06889 387 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 KCTD21Q4G0X4 260 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 RBM48Q5RL73 367 aaKnown RBP12.85□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF684Q5T5D7 378 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 SLC22A25Q6T423 547 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 PLEKHG7Q6ZR37 379 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF101Q8IZC7 436 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 STX19Q8N4C7 294 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 OR1J2Q8NGS2 313 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 SNX33Q8WV41 574 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF799Q96GE5 643 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 RADILQ96JH8 1075 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 KCNJ15Q99712 375 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 ALG8Q9BVK2 526 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 JAM3Q9BX67 310 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 OR51B6Q9H340 312 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 DUSP21Q9H596 190 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 ELOVL3Q9HB03 270 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 CDH20Q9HBT6 801 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 CLEC2DQ9UHP7 191 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 TPRKBQ9Y3C4 175 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 GRIP1Q9Y3R0 1128 aa12.85□□□□□ -0.35
CCNE1-202ENST00000357943 A0A1W2PPR1 153 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms