RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 DAZLQ92904 295 aaKnown RBP16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 MRPS24Q96EL2 167 aaKnown RBP16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 SOX7Q9BT81 388 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 CST11Q9H112 138 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 ZNF304Q9HCX3 659 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 RHBDD3Q9Y3P4 386 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 SESN1Q9Y6P5 492 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 OR14I1A6ND48 311 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 H3BML4 177 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 RAB27BO00194 218 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 APOC3P02656 99 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 ANOS1P23352 680 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 POU3F1Q03052 451 aaPredicted RBP16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 CCDC107Q8WV48 283 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 ST8SIA2Q92186 375 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 ADAT3Q96EY9 351 aaPredicted RBP16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 ZDHHC12Q96GR4 267 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 PDCD10Q9BUL8 212 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 MED9Q9NWA0 146 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 COPS7AQ9UBW8 275 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 SUSD2Q9UGT4 822 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 ARID1AO14497 2285 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 A0A1W2PQD3 144 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 D6RAR5 112 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 GNB3P16520 340 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 FBLP22087 321 aaKnown RBP16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 CD34P28906 385 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 LUMP51884 338 aaPredicted RBP16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 CAPZA1P52907 286 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 ATP1B3P54709 279 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 UNC119Q13432 240 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 ELP2Q6IA86 826 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 PAPD4Q6PIY7 484 aaKnown RBP16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 OVCH2Q7RTZ1 564 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 LYPD6Q86Y78 171 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 ZBTB8AQ96BR9 441 aa16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 SLC25A21Q9BQT8 299 aaPredicted RBP16.15■□□□□ 0.18
PTP4A3-202ENST00000349124 A0A1W2PR77 199 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 CRABP1P29762 137 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 PNLIPRP2P54317 469 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 PPP1R1AQ13522 171 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 ZNF584Q8IVC4 421 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 OR2I1PQ8NGU4 316 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 OR10K1Q8NGX5 313 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 LHFPL5Q8TAF8 219 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 CASTOR1Q8WTX7 329 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 UPB1Q9UBR1 384 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 ASCC3Q8N3C0 2202 aaKnown RBP16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 DCAF7P61962 342 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 PTCRAQ6ISU1 281 aaPredicted RBP16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 TRAPPC6BQ86SZ2 158 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 ADAD2Q8NCV1 583 aaKnown RBP16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 ZNF248Q8NDW4 579 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 PPP1R1CQ8WVI7 109 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 EDEM2Q9BV94 578 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 FRYLO94915 3013 aa16.14■□□□□ 0.17
PTP4A3-202ENST00000349124 SULT1C2O00338 296 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 TO15178 435 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 CD74P04233 296 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 MELTFP08582 738 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 FSTP19883 344 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 HSD11B2P80365 405 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 BAMBIQ13145 260 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 ZNF260Q3ZCT1 412 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 JMJD6Q6NYC1 403 aaPredicted RBP16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 OR5M8Q8NGP6 311 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 A0A1B0GTI1 187 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 TTLL8A6PVC2 850 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 KRBOX1C9JBD0 128 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 NPIPA5E9PKD4 350 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 ZNF217O75362 1048 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 AQP8O94778 261 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 H2BFMP0C1H6 154 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 CD37P11049 281 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 SLC2A1P11166 492 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 CSNK1EP49674 416 aaKnown RBP16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 FOXK1P85037 733 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 ZNF441Q8N8Z8 693 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 TSTD1Q8NFU3 115 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 ASB10Q8WXI3 467 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 THRSPQ92748 146 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 VRK1Q99986 396 aaPredicted RBP16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 NPIPA1Q9UND3 350 aa16.13■□□□□ 0.17
PTP4A3-202ENST00000349124 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 HRH1P35367 487 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 CD96P40200 585 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 SSBP1Q04837 148 aaKnown RBP16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 ZNF273Q14593 569 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 C1orf100Q5SVJ3 147 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 TFAP2EQ6VUC0 442 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 ZNF813Q6ZN06 617 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 KCTD9Q7L273 389 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 C17orf82Q86X59 251 aaPredicted RBP16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 SMRP1Q8NCR6 262 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 PXT1Q8NFP0 134 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 OIT3Q8WWZ8 545 aa16.12■□□□□ 0.17
PTP4A3-202ENST00000349124 AQP3Q92482 292 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms