RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 TNFRSF11BO00300 401 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 PCMT1P22061 227 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 NOS3P29474 1203 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 SRP14P37108 136 aaKnown RBP11.25□□□□□ -0.61
CLCC1-202ENST00000348264 HMGA2P52926 109 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 TNFAIP6P98066 277 aaPredicted RBP11.25□□□□□ -0.61
CLCC1-202ENST00000348264 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLCC1-202ENST00000348264 PPP1R8Q12972 351 aaKnown RBP11.25□□□□□ -0.61
CLCC1-202ENST00000348264 CDK5R2Q13319 367 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 HLXQ14774 488 aaPredicted RBP11.25□□□□□ -0.61
CLCC1-202ENST00000348264 SLC35F1Q5T1Q4 408 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 ZNF770Q6IQ21 691 aaPredicted RBP11.25□□□□□ -0.61
CLCC1-202ENST00000348264 LCN8Q6JVE9 175 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 CFAP77Q6ZQR2 320 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 ZNF771Q7L3S4 317 aaPredicted RBP11.25□□□□□ -0.61
CLCC1-202ENST00000348264 ZBTB46Q86UZ6 589 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 GJC3Q8NFK1 279 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 OR8D4Q8NGM9 314 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 TIMD4Q96H15 378 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 NSL1Q96IY1 281 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 DIRC2Q96SL1 478 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 COQ7Q99807 217 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 EGLN1Q9GZT9 426 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 HDHD2Q9H0R4 259 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 VNN3Q9NY84 501 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 PTTG3PQ9NZH4 202 aa11.25□□□□□ -0.61
CLCC1-202ENST00000348264 DOCK11Q5JSL3 2073 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 J3QW42 95 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 BHLHE40O14503 412 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 IDH3BO43837 385 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 KRT36O76013 467 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 FAM107AO95990 144 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 T-ENOLP0DO92 83 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 TUBG1P23258 451 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 RGS6P49758 472 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 MS4A2Q01362 244 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 RSPO1Q2MKA7 263 aaPredicted RBP11.24□□□□□ -0.61
CLCC1-202ENST00000348264 SLC18B1Q6NT16 456 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 OR5AS1Q8N127 324 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 CYB561A3Q8NBI2 242 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 CCDC197Q8NCU1 140 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 OR2Z1Q8NG97 314 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 OR52L1Q8NGH7 329 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 OR52E2Q8NGJ4 325 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 RAB1CQ92928 201 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 HAVCR1Q96D42 359 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 RAB39BQ96DA2 213 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 COG8Q96MW5 612 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 DCLRE1CQ96SD1 692 aaKnown RBP11.24□□□□□ -0.61
CLCC1-202ENST00000348264 GAL3ST1Q99999 423 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 MUC13Q9H3R2 512 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 G6PC2Q9NQR9 355 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 TUBG2Q9NRH3 451 aa11.24□□□□□ -0.61
CLCC1-202ENST00000348264 MRPL22Q9NWU5 206 aaKnown RBP11.24□□□□□ -0.61
CLCC1-202ENST00000348264 TRAV20A0A0B4J274 112 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 ISPDA4D126 451 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 PLPP2O43688 288 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 CCNB2O95067 398 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 GASTP01350 101 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 RAC2P15153 192 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 CALB2P22676 271 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 PYCR1P32322 319 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 GGT2P36268 569 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 SLC3A1Q07837 685 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 KRTAP27-1Q3LI81 207 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 ACSM5Q6NUN0 579 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 RPL13AP3Q6NVV1 102 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 LYPD4Q6UWN0 246 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 FBXW12Q6X9E4 464 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 DHFR2Q86XF0 187 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 ARHGAP24Q8N264 748 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 AQP11Q8NBQ7 271 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 ITLN1Q8WWA0 313 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 PTP4A1Q93096 173 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 APOBEC3DQ96AK3 386 aaPredicted RBP11.23□□□□□ -0.61
CLCC1-202ENST00000348264 CCDC124Q96CT7 223 aaKnown RBP11.23□□□□□ -0.61
CLCC1-202ENST00000348264 CLPTM1LQ96KA5 538 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 DDOQ99489 341 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 REPIN1Q9BWE0 567 aaKnown RBP11.23□□□□□ -0.61
CLCC1-202ENST00000348264 TRIM15Q9C019 465 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 MAGIXQ9H6Y5 334 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 PNRC2Q9NPJ4 139 aaKnown RBP11.23□□□□□ -0.61
CLCC1-202ENST00000348264 CYB5R1Q9UHQ9 305 aa11.23□□□□□ -0.61
CLCC1-202ENST00000348264 SOX14O95416 240 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 PNPP00491 289 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 AVPP01185 164 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 IGHV2-70P01814 119 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 HLA-DQA2P01906 255 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 ACSM4P0C7M7 580 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 PSKH1P11801 424 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 TNFSF4P23510 183 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 RPS27P42677 84 aaKnown RBP11.22□□□□□ -0.61
CLCC1-202ENST00000348264 PRSS12P56730 875 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 TRIM25Q14258 630 aaKnown RBP11.22□□□□□ -0.61
CLCC1-202ENST00000348264 SLC36A3Q495N2 470 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 OR2T2Q6IF00 324 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 COLCA1Q6ZS62 124 aa11.22□□□□□ -0.61
CLCC1-202ENST00000348264 C1orf229Q6ZS94 237 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms