RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 GRHPRQ9UBQ7 328 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 HEATR5AQ86XA9 2040 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 TRBV6-7A0A0A0MS04 114 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 UMAD1C9J7I0 102 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 MOSPD3O75425 235 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 PNPP00491 289 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 OR13C7P0DN81 318 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 PEBP1P30086 187 aaKnown RBP13.79□□□□□ -0.2
LMNA-201ENST00000347559 GPR18Q14330 331 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 ALG10Q5BKT4 473 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 PRSS54Q6PEW0 395 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.79□□□□□ -0.21e-7■□□□□ 10.4
LMNA-201ENST00000347559 RTN4RL2Q86UN3 420 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 SLC43A2Q8N370 569 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 OR13C9Q8NGT0 318 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 OR2L8Q8NGY9 312 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 CA5BP1Q8WTZ4 195 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 SLC25A43Q8WUT9 341 aaPredicted RBP13.79□□□□□ -0.2
LMNA-201ENST00000347559 GAL3ST3Q96A11 431 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 TAAR9Q96RI9 348 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 SLC5A7Q9GZV3 580 aa13.79□□□□□ -0.2
LMNA-201ENST00000347559 IGLON5A6NGN9 336 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 IFITM10A6NMD0 228 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 OR10H2O60403 315 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 HOXB5P09067 269 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 DNASE1L1P49184 302 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 MIDNQ504T8 468 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 OR2A2Q6IF42 318 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 CLEC9AQ6UXN8 241 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 ZNF765Q7L2R6 523 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 RCBTB1Q8NDN9 531 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 RNF128Q8TEB7 428 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 MOGAT1Q96PD6 335 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 ZNF587Q96SQ5 575 aaPredicted RBP13.78□□□□□ -0.2
LMNA-201ENST00000347559 INTS14Q96SY0 518 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 PDE7BQ9NP56 450 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 SLC2A4RGQ9NR83 387 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 PLA2G2EQ9NZK7 142 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 HCFC2Q9Y5Z7 792 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 GMFGO60234 142 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 HOXC4P09017 264 aaPredicted RBP13.78□□□□□ -0.2
LMNA-201ENST00000347559 MDGA2Q7Z553 956 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 TMEM52Q8NDY8 209 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 CCDC54Q8NEL0 328 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 OR10C1Q96KK4 312 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 JSRP1Q96MG2 331 aaPredicted RBP13.78□□□□□ -0.2
LMNA-201ENST00000347559 TGM7Q96PF1 710 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 FBXO7Q9Y3I1 522 aa13.78□□□□□ -0.2
LMNA-201ENST00000347559 PUS1Q9Y606 427 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMNA-201ENST00000347559 TRBV23OR9-2A0A075B6M9 112 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 SOX1O00570 391 aaPredicted RBP13.77□□□□□ -0.2
LMNA-201ENST00000347559 B3GALT2O43825 422 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 GNB3P16520 340 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 HOXA5P20719 270 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 RBP2P50120 134 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 SULT1A2P50226 295 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 PRPS1P60891 318 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 FHL5Q5TD97 284 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 FAM166AQ6J272 317 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 PRSS41Q7RTY9 318 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 OR52R1Q8NGF1 315 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 OR5T3Q8NGG3 340 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 CDC6Q99741 560 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 B9D1Q9UPM9 204 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 DOCK9Q9BZ29 2069 aa13.77□□□□□ -0.2
LMNA-201ENST00000347559 IGKV1D-16P01601 117 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 SLC35G6P0C7Q6 338 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 BTF3P20290 206 aaKnown RBP13.77□□□□□ -0.21
LMNA-201ENST00000347559 EIF5AP63241 154 aaKnown RBP13.77□□□□□ -0.21
LMNA-201ENST00000347559 GAMTQ14353 236 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 RSU1Q15404 277 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 GUK1Q16774 197 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 CYB5R2Q6BCY4 276 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 UBAC2Q8NBM4 344 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 TMEM104Q8NE00 496 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 OR56B1Q8NGI3 324 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 SUCNR1Q9BXA5 334 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 PPP4R1LQ9P1A2 415 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 DAPP1Q9UN19 280 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 OR2C1O95371 312 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 CSTAP01040 98 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 CSTBP04080 98 aaKnown RBP13.77□□□□□ -0.21
LMNA-201ENST00000347559 C8AP07357 584 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 SPARCP09486 303 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 SLC6A9P48067 706 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 CEBPGP53567 150 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 SURF2Q15527 256 aaPredicted RBP13.77□□□□□ -0.21
LMNA-201ENST00000347559 USF2Q15853 346 aaPredicted RBP13.77□□□□□ -0.21
LMNA-201ENST00000347559 EEF1A1P5Q5VTE0 462 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 ZNF529Q6P280 563 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 LINC00114Q6XXX2 140 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 COX14Q96I36 57 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 DOK5Q9P104 306 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 DNAH14Q0VDD8 3507 aa13.77□□□□□ -0.21
LMNA-201ENST00000347559 A0A087WUJ7 227 aa13.76□□□□□ -0.21
LMNA-201ENST00000347559 WIPF3A6NGB9 483 aa13.76□□□□□ -0.21
LMNA-201ENST00000347559 ARGFXA6NJG6 315 aa13.76□□□□□ -0.21
LMNA-201ENST00000347559 SLC31A2O15432 143 aa13.76□□□□□ -0.21
LMNA-201ENST00000347559 PRKNO60260 465 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms